Commits on Jan 17, 2013
  1. v0.9.41

    committed Jan 17, 2013
Commits on Jan 15, 2013
  1. v0.9.40

    committed Jan 15, 2013
  2. Updated VCF INFO fields

    committed Jan 15, 2013
Commits on Jan 14, 2013
  1. set link flag

    committed Jan 14, 2013
  2. Fixed file extension in Makefile

    committed Jan 14, 2013
  3. v0.9.39

    committed Jan 14, 2013
  4. Integrating bug fixes from Kees.

    committed Jan 14, 2013
Commits on Jan 9, 2013
  1. v0.9.38

    committed Jan 9, 2013
  2. Fix links to miseq data set

    committed Jan 9, 2013
  3. Fixed bug where k-mer coverage parameter would be incorrectly estimat…

    …ed for super-deep data
    committed Jan 9, 2013
Commits on Jan 8, 2013
  1. Minor output formatting changes

    committed Jan 8, 2013
  2. Cleaned up graph-diff output

    committed Jan 8, 2013
  3. Fix VCF headers

    committed Jan 8, 2013
Commits on Jan 7, 2013
  1. Removing cruft

    committed Jan 7, 2013
  2. Turned off profiler

    committed Jan 7, 2013
  3. Merge branch '1000genomes'

    committed Jan 7, 2013
Commits on Dec 20, 2012
Commits on Dec 18, 2012
Commits on Dec 17, 2012
Commits on Dec 7, 2012
  1. Merge pull request #32 from LeeMendelowitz/bubbleOrientationIssue

    bubble orientation fix
    committed Dec 7, 2012
  2. Merge pull request #33 from LeeMendelowitz/statsReverseIndexFix

    removed sga stats requirement for reverse index
    committed Dec 7, 2012
Commits on Dec 5, 2012
  1. @LeeMendelowitz

    removed sga stats requirement for reverse index

    sga stats does not require the reverse index if
    using the --no-overlap option.
    LeeMendelowitz committed Dec 5, 2012
  2. @LeeMendelowitz

    bubble orientation fix

    Fixed issue where a bubble would be labeled as cleanly removable
    even if the variant walks from X to Y had different orientations
    for Y.
    LeeMendelowitz committed Dec 5, 2012
Commits on Nov 26, 2012
Commits on Nov 23, 2012
  1. Fixed bug where the hybrid error correction mode was using the deprec…

    …ated overlap corrector, leading to a crash.
    committed Nov 23, 2012
  2. v0.9.37

    committed Nov 23, 2012