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ClusterProcess.cpp
ClusterProcess.h
ConnectProcess.cpp
ConnectProcess.h
DPAlignment.cpp
DPAlignment.h
ErrorCorrectProcess.cpp
ErrorCorrectProcess.h
ExtensionDP.cpp
ExtensionDP.h
FMMergeProcess.cpp
FMMergeProcess.h
GapFillProcess.cpp
GapFillProcess.h
HapgenProcess.cpp
HapgenProcess.h
HaplotypeBuilder.cpp
HaplotypeBuilder.h
KmerOverlaps.cpp
KmerOverlaps.h
LRAlignment.cpp
LRAlignment.h
LRCorrectionAlgorithm.cpp
LRCorrectionAlgorithm.h
LRCorrectionProcess.cpp
LRCorrectionProcess.h
Makefile.am
MetAssembleProcess.cpp
MetAssembleProcess.h
MetagenomeBuilder.cpp
MetagenomeBuilder.h
OverlapAlgorithm.cpp
OverlapAlgorithm.h
OverlapBlock.cpp
OverlapBlock.h
OverlapTools.cpp
OverlapTools.h
QCProcess.cpp
QCProcess.h
ReadCluster.cpp
ReadCluster.h
SearchHistory.cpp
SearchHistory.h
SearchSeed.cpp
SearchSeed.h
StatsProcess.cpp
StatsProcess.h
StringGraphGenerator.cpp
StringGraphGenerator.h
StringThreader.cpp
StringThreader.h
VariationBuilderCommon.cpp
VariationBuilderCommon.h
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