Skip to content

Latest commit

 

History

136 Commits

Folders and files

NameName
Last commit message
Last commit date
 
 
 
 
 
 
 
 
 
 

Repository files navigation

dbCNS

dbCNS is a database and an identification pipeline for conserved noncoding sequences (CNSs) of vertebrates. The database contains 2 sources: more than 6,800,000 published CNSs and 171 genome sequences.
Users can
- find CNSs near interested genes from the database by uploading keywords.
- construct multiple sequence alignments and CNS trees by uploading CNS sequences as queries.

Web sites

AORI-yurai (from 5 May 2025) - fast
https://yurai.aori.u-tokyo.ac.jp/dbcns/index.html

NIG (from 27 Jan 2020)
http://yamasati.nig.ac.jp/dbcns/dbcns101.html


Instruction

English
http://133.167.86.72/dbcns/instructionENG.html.

日本語の例題集
https://fish-evol.org/dbcns/instructionJPN.html).


Citation

Inoue, J., Saitou, N. 2021. dbCNS: a new database for conserved noncoding sequences. Molecular Biology and Evolution 38: 1665–1676. Link.


Contact

Email: jinoueATg.ecc.u-tokyo.ac.jp

About

Database of conserved non-coding sequence

Resources

Stars

0 stars

Watchers

1 watching

Forks

Releases

Packages

Contributors

Languages