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@SciLifeLab
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Popular repositories

  1. Forked from guillermo-carrasco/BestPracticesWorkshop

    Repository for the workshop "Best practices on development"

    Python

  2. Forked from SciLifeLab/cloudbiolinux

    CloudBioLinux: automating resource preparation for biological analysis

    Python

  3. Forked from SciLifeLab/scilifelab

    Misc code snippets for Science For Life Laboratory

    Python

  4. Forked from nf-core/smrnaseq

    Analysis pipeline for small-RNA sequencing data.

    Nextflow

  5. Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

    Nextflow

2 contributions in the last year

Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Mon Wed Fri

Contribution activity

May - August 2019

jun-wan has no activity yet for this period.

April 2019

Created an issue in nf-core/rnaseq that received 14 comments

Revert to use BigWig (geneBody_coverage2.py) to calculate the gene body coverage?

Script geneBody_coverage2.py (uses bigwig file as input) in RSeQC v3.0.0 is improved a lot by adding pyBigWig package. It took ~50min. for 12GB BAM…

14 comments

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