BMRF
Implementation of Bayesian Markov Random Field-based protein function prediction algorithm.
The package is pre-alpha-stage, so take care.
You can find more information on http://www.ab.wur.nl/bmrf.
Installation goes like this:
in R:
> install.packages(c("glmnet", "mvtnorm", "brglm"))
in the shell:
$ g clone https://github.com/jwbargsten/bmrf.git
$ cd bmrf
$ R CMD INSTALL .
An example is in:
tests/test_basic.R