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Implementation of Bayesian Markov Random Field-based protein function prediction algorithm
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README.md

BMRF

Implementation of Bayesian Markov Random Field-based protein function prediction algorithm.

The package is pre-alpha-stage, so take care.

You can find more information on http://www.ab.wur.nl/bmrf.

Installation goes like this:

in R:

> install.packages(c("glmnet", "mvtnorm", "brglm"))

in the shell:

$ g clone https://github.com/jwbargsten/bmrf.git
$ cd bmrf
$ R CMD INSTALL .

An example is in: tests/test_basic.R

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