From 1d9e25490eb8aa7eb91f17154389001b9bcdd2e0 Mon Sep 17 00:00:00 2001 From: Kai Date: Tue, 11 Apr 2017 11:31:35 +0200 Subject: [PATCH] =?UTF-8?q?Began=20adding=20Pier=E2=80=99s=20orcid=20to=20?= =?UTF-8?q?the=20project=20cryophile=20classes=20created.=20Addressed=20th?= =?UTF-8?q?e=20melt=20pond=20#489,=20and=20thaw=20hole=20hierarchies,=20cr?= =?UTF-8?q?eating=20the=20upper=20level=20class=20channel=20and=20moving?= =?UTF-8?q?=20tunnel=20under=20it.=20Also=20made=20issue=20requesting=20fo?= =?UTF-8?q?r=20a=20class=20such=20as=20PATO:microbial=20community=20#499.?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- src/envo/envo-edit.owl | 172 ++++++++++++++++++++++++++++++++++++++++--------- 1 file changed, 143 insertions(+), 29 deletions(-) diff --git a/src/envo/envo-edit.owl b/src/envo/envo-edit.owl index fc91cdf..13d5166 100644 --- a/src/envo/envo-edit.owl +++ b/src/envo/envo-edit.owl @@ -2532,6 +2532,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2651,10 +2654,6 @@ AnnotationAssertion(rdfs:label "ter AnnotationAssertion(rdfs:label "alternative term") -# Annotation Property: (definition source) - -AnnotationAssertion(rdfs:label "definition source") - # Annotation Property: (curator note) AnnotationAssertion(rdfs:label "curator note") @@ -4298,7 +4297,7 @@ AnnotationAssertion(Annotation( "Getty:TGN"^^xsd:string) "natural tunnel"^^xsd:string) AnnotationAssertion( "ENVO:00000068"^^xsd:string) AnnotationAssertion(rdfs:label "tunnel"^^xsd:string) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (distributary) @@ -4651,6 +4650,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Alpine_glacier") Annotation( "https://en.wikipedia.org/wiki/Glacier#Types"^^xsd:string) Annotation( "https://pubs.usgs.gov/of/2004/1216/text.html") "A glacier contained in the site of a mountain valley."^^xsd:string) AnnotationAssertion( "We need to added classes such as \"valley site\" in order to fully axiomatize this class") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "ENVO"^^xsd:string) AnnotationAssertion( "ENVO:00000085"^^xsd:string) AnnotationAssertion(rdfs:label "alpine glacier"^^xsd:string) @@ -5711,6 +5711,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Glacier"^^xsd:string) "An ice mass which is of sufficient mass that the action of gravity upon it overcomes the frictional forces holding it in place, causing it to deform and flow towards lower elevation."^^xsd:string) AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(Annotation( "ADL:FTT"^^xsd:string) "glacial feature"^^xsd:string) AnnotationAssertion( "EcoLexicon:glacier"^^xsd:string) AnnotationAssertion( "FTT:648"^^xsd:string) @@ -10493,6 +10494,7 @@ SubClassOf( "https://en.wikipedia.org/wiki/Glacial_lake") "A lake which is primarily composed of glacial meltwater and which fills a depression formed as a result of a glacial erosion process."^^xsd:string) AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "https://en.wikipedia.org/wiki/Glacial_lake"^^xsd:string) AnnotationAssertion( "ENVO"^^xsd:string) AnnotationAssertion( "ENVO:00000488"^^xsd:string) @@ -26321,7 +26323,7 @@ SubClassOf( ObjectSomeValuesFrom(< # Class: (ablation zone) -AnnotationAssertion(Annotation(rdfs:comment "http://orcid.org/0000-0002-3410-4655") "An environmental zone which is primarily composed of water ice, present as a glacier or an ice sheet, and in which ice loss exceeds ice gain.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Ablation_zone") "An environmental zone which is primarily composed of water ice, present as a glacier or an ice sheet, and in which ice loss exceeds ice gain.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "ablation zone"@en) @@ -27966,6 +27968,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/N%C3%A9v%C3%A9") "Partially compacted granular snow, which has undergone several cycles of melting and refreezing while being compacted, usually found on the atmosphere-exposed surface of a glacier.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "neve") AnnotationAssertion(rdfs:comment "Névé that survives a full season of ablation turns into firn.") AnnotationAssertion(rdfs:label "névé"@en) @@ -27977,6 +27980,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Firn") "Granular snow which contains a proportion of fused granules formed through melting and re-thawing while being compacted by the weight of overlying material and which contains interconnected gaseous pores.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Firn derives from névé which has survived a full season of ablation and has undergone a metamorphic transition.") AnnotationAssertion(rdfs:label "firn"@en) SubClassOf( ) @@ -27988,6 +27992,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Nivation") "A material transformation process during which recently precipitated, powdery snow transitions into firn or névé through compaction and/or through cycles of freezing and thawing.") AnnotationAssertion( "Link to mass wasting process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Often, the weight of material deposited on top of powdery snow by, for example, mass wasting, can lead to nivation.") AnnotationAssertion(rdfs:label "nivation"@en) SubClassOf( ) @@ -28001,6 +28006,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Glacier") "Any water ice that is part of a glacier.") AnnotationAssertion( "It is suggested that users complement this term with ice terms that are more descriptive of the ice itself, rather than its location/parthood.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "glacial ice"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -28009,6 +28015,7 @@ SubClassOf( "https://www.asf.alaska.edu/blog/why-is-glacier-ice-blue/") "Glacial ice which contains material liberated during a glacial erosion process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "erosionally enriched glacial ice"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28018,6 +28025,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "An erosion process during which the movement of a glacier across a terrestrial surface causes the removal of material from that surface.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "glacial erosion process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28025,19 +28033,18 @@ SubClassOf( ObjectSomeValuesFrom(< # Class: (blue ice) -AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Blue_ice_(glacial)") "Water ice containing little to no air bubbles resulting in a reduction of internal light scattering and, given sufficient volume, a blue appearance.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Blue_ice_(glacial)") Annotation( "https://en.wikipedia.org/wiki/Glacier") "Water ice containing little to no air bubbles resulting in a reduction of internal light scattering and, given sufficient volume, a blue appearance.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") -AnnotationAssertion( "https://en.wikipedia.org/wiki/Blue_ice_(glacial)") -AnnotationAssertion( "https://en.wikipedia.org/wiki/Glacier") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "The blue 'appearance' is to be understood as that within the visual range of humans.") AnnotationAssertion(rdfs:label "blue ice"@en) SubClassOf( ) # Class: (compaction process) -AnnotationAssertion( "A physical process during which atoms, molecules, or other consituents of a material entity are forced closer together.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Compaction") "A physical process during which atoms, molecules, or other consituents of a material entity are forced closer together.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") -AnnotationAssertion( "https://en.wikipedia.org/wiki/Compaction") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "compaction process"@en) SubClassOf( ) @@ -28045,6 +28052,7 @@ SubClassOf( "A process during which the mass of one or more materials, present within a given site, increases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "A material accumulation process ends a material transport process.") AnnotationAssertion(rdfs:label "material accumulation process"@en) SubClassOf( ) @@ -28054,6 +28062,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A process during which material is displaced from it's original location and transported either to a new location or back to the original location.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "material transport process"@en) SubClassOf( ) @@ -28061,6 +28070,7 @@ SubClassOf( "https://en.wikipedia.org/wiki/Ablation_zone") "A material accumulation process during which the mass of an existing ice mass increases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "ice gain"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28070,6 +28080,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A material transport process during which the snow and ice constituting a glacier, and anything contained within it, is transported down a slope by gravitation.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "glacial movement") AnnotationAssertion(rdfs:comment "This must be differentiated from small ice masses simply falling or moving down slopes.") AnnotationAssertion(rdfs:label "glacial transport process"@en) @@ -28080,6 +28091,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://pubs.usgs.gov/of/2004/1216/text.html") "A small glacier contained within a cirque basin.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "cirque glacier"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28087,17 +28099,18 @@ SubClassOf( ObjectSomeValuesFrom(< # Class: (cirque basin) -AnnotationAssertion( "A semicircular or crescent-shaped depression formed by the erosional processes caused by the motion of a glacier.") +AnnotationAssertion(Annotation( "http://www.thefreedictionary.com/Glacial+cirque") "A semicircular or crescent-shaped depression formed by the erosional processes caused by the motion of a glacier.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") -AnnotationAssertion( "http://www.thefreedictionary.com/Glacial+cirque") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "cirque basin"@en) SubClassOf( ) # Class: (geographic basin) -AnnotationAssertion( "A depression which is part of a planetary crust, is of geographic scale, and is partially or completely enclosed.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Basin") "A depression which is part of a planetary crust, is of geographic scale, and is partially or completely enclosed.") +AnnotationAssertion( "The general semantics of depression and geographic basin are still to be worked out see https://github.com/EnvironmentOntology/envo/issues/486") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") -AnnotationAssertion( "https://en.wikipedia.org/wiki/Basin") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "geographic basin"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28106,6 +28119,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://www.merriam-webster.com/dictionary/decumulation") "A process during which the mass of one or more materials, present within a given site, decreases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "material decumulation process"@en) SubClassOf( ) @@ -28113,6 +28127,7 @@ SubClassOf( "A process during which the mass of ice constituting a glacier decreases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "glacial ice loss"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28122,6 +28137,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://oxfordindex.oup.com/view/10.1093/oi/authority.20110803095752518") "A stream which is primarily composed of meltwater and which flows within a glacier or ice sheet.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "englacial stream"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectUnionOf( ))) @@ -28131,6 +28147,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Aeolian_processes") "A material transport process during which one or more environmental materials are transported by the action of wind.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "eolian") AnnotationAssertion( "æolian") AnnotationAssertion(rdfs:label "aeolian transport process"@en) @@ -28142,6 +28159,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Soot") "Particulate matter primarily composed of carbon particles formed through the incomplete combustion of hydrocarbons.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "soot"@en) SubClassOf( ) @@ -28149,6 +28167,7 @@ SubClassOf( "https://www.asf.alaska.edu/blog/why-is-glacier-ice-blue/") "Water ice which contains material liberated during an erosion process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "erosionally enriched ice"@en) SubClassOf( ) @@ -28156,6 +28175,7 @@ SubClassOf( "https://en.wikipedia.org/wiki/Types_of_snow") Annotation( "https://nsidc.org/cryosphere/snow/science/characteristics.html") "Uncompacted snow containing trapped atmospheric gases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Described as having a fluffy appearance.") AnnotationAssertion(rdfs:label "powdery snow"@en) SubClassOf( ) @@ -28164,6 +28184,7 @@ SubClassOf( "A process during which the mass of ice constituting a glacier increases.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "glacial ice gain"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28209,6 +28230,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Pelagic_sediment#_note-8") "Sediment which has been transported through the marine water column, settling on the seafloor.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Particles of marine sediment are primarily generated by 1) processes in terrestrial systems and transported to the marine realm by the action of rivers or aeolian processes (amongst other routes) , 2) marine organisms, 3) chemical processes in seawater, or 4) cosmogeneous input.") AnnotationAssertion(rdfs:label "marine sediment"@en) SubClassOf( ) @@ -28221,6 +28243,7 @@ AnnotationAssertion(Annotation( "In this definition we refer to sedimentation processes that occured above the shelf, however this should be relaxed to include the continental shelf and slope.") AnnotationAssertion( "output of sedimentation process which occured in neritic zone biome") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "neritic marine sediment") AnnotationAssertion(rdfs:label "shallow marine sediment"@en) SubClassOf( ) @@ -28231,6 +28254,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Supraglacial_lake") "A water body which is located in a depression within the surface of a glacier.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "supraglacial lake"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28249,6 +28273,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Ablation") "An ablation zone in which an ice ablation process occurs.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "ice ablation zone"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28256,9 +28281,10 @@ SubClassOf( ObjectSomeValuesFrom(< # Class: (cryoconite) AnnotationAssertion(Annotation( "http://www.nature.com/nrmicro/journal/v13/n11/full/nrmicro3522.html") Annotation( "https://en.wikipedia.org/wiki/Cryoconite") "Particulate matter which is composed primarily of dust, rock, and soot, as well as the microbial communities associated with these materials, deposited on an ice mass by an aeolian process.") -AnnotationAssertion( "Need to encapsulate subclass axiom 'has part' some microorganism. see https://github.com/EnvironmentOntology/envo/issues/483 and https://github.com/PopulationAndCommunityOntology/pco/issues/22") +AnnotationAssertion( "Need to encapsulate subclass axiom 'has part' some microorganism. Pending from ENVO #499.") AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "envoPolar") AnnotationAssertion(rdfs:label "cryoconite"@en) SubClassOf( ) @@ -28269,20 +28295,23 @@ SubClassOf( ObjectSomeValuesFrom(< # Class: (cryoconite hole) -AnnotationAssertion(Annotation( "http://glaciers.pdx.edu/Projects/Antarctica/CryoconiteHoles/Cryo_main.html") "A vertical hole within an ice mass, formed by ice melt associated with local temperature increases, due to increased absorption of solar radiation by cryoconite deposits.") +AnnotationAssertion(Annotation( "http://glaciers.pdx.edu/Projects/Antarctica/CryoconiteHoles/Cryo_main.html") "A vertical thaw hole within an ice mass, formed by ice melt associated with local temperature increases, due to increased absorption of solar radiation by cryoconite deposits.") AnnotationAssertion( "The general semantics of depressions are still to be worked out see https://github.com/EnvironmentOntology/envo/issues/486") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "This class doesn't refer to the site but instead the depression or hole and therefore the adjacency to the cryoconite itself.") AnnotationAssertion(rdfs:label "cryoconite hole"@en) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) # Class: (melt pond) -AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Melt_pond") "A water body which forms as a result of localised melting taking place on the surface of a glacier or a mass of sea ice and is contained in the cavity formed by such melting.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Melt_pond") "A water body which forms as a result of localised melting taking place on the surface of a glacier or a mass of sea ice and which is contained in the cavity formed by such melting.") +AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") +AnnotationAssertion( "meltpond") AnnotationAssertion(rdfs:label "melt pond"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28293,8 +28322,9 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://askabiologist.asu.edu/brine-channels") "A channel through which brine flows.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "brine channel"@en) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -28302,6 +28332,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary/term/frazil") "A material accumulation process during which brine droplets, trapped between ice crystals formed during seawater freezing, form brine channels.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "A brine channel formation process can be considered a material accumulation process because brine accumulates due to a brine rejection process, a material transformation process during which brine is formed due to the expulsion of salt during a seawater freezing process. This results in an accumulation of brine droplets, which are droplets of expelled salt dissolved in water, which remain in a liquid state due to their increased salinity.") AnnotationAssertion(rdfs:label "brine channel formation process"@en) SubClassOf( ) @@ -28315,6 +28346,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A process during which a portion of some environmental material is converted into a different material or a collection of materials.") AnnotationAssertion( "A different material transformation process class (or similarly named class) pertaining to the conversion of a specific chemical into another belongs in CHEBI and or REX ontologies.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "A material transformation process only refers to ENVO:environmental material classes (e.g. bulk and typically impure substances), rather than transformations converting a specific chemical into another.") AnnotationAssertion(rdfs:label "material transformation process"@en) SubClassOf( ) @@ -28324,6 +28356,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://www.waterencyclopedia.com/Re-St/Sea-Water-Freezing-of.html") "A material transformation process during which seawater freezes into sea ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "sea ice formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28333,6 +28366,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Brine_rejection") "A material transformation process during which brine is formed due to the expulsion of salt during frazil formation or a seawater freezing process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Expelled salt accumulates in brine droplets, which remain in a liquid state due to their increased salinity.") AnnotationAssertion(rdfs:label "brine rejection from seawater"@en) SubClassOf( ) @@ -28344,6 +28378,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary/term/frazil") "New ice which is composed of small, needle-like crystals consisting of nearly pure fresh water.") AnnotationAssertion( "Needs to have axioms added pertaining to the semantics of colloids and suspensions once they have been resolved see: https://github.com/pato-ontology/pato/issues/91#issuecomment-290711238") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Typically 3 to 4 millimeters in diameter.") AnnotationAssertion(rdfs:label "frazil ice"@en) SubClassOf( ) @@ -28354,6 +28389,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Frazil_ice#Formation") Annotation( "https://nsidc.org/cryosphere/glossary/term/frazil") "A new ice formation process in which frazil ice crystals form due to the freezing of open, turbulent, supercooled water.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "frazil ice formation"@en) SubClassOf( ) SubClassOf( ) @@ -28365,28 +28401,36 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary-terms/sea-ice") "A vertical meltpond hole which has formed through an ice mass floating on a water body, bridging the atmosphere to the underlying water.") AnnotationAssertion( "Will need to be moved once the defintion for channel is revised. See https://github.com/EnvironmentOntology/envo/issues/147") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "thaw hole"@en) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) -# Class: (atmosphere-exposed meltpond) +# Class: (atmosphere-exposed melt pond) -AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Melt_pond") "A meltpond which is located toward the surface of an ice mass, exposed to the atmosphere but closed to the bottom of the ice mass or to any underlying water.") +AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Melt_pond") "A melt pond which is located toward the surface of an ice mass, exposed to the atmosphere but closed to the bottom of the ice mass or to any underlying water.") +AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") -AnnotationAssertion(rdfs:label "atmosphere-exposed meltpond"@en) +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") +AnnotationAssertion(rdfs:label "atmosphere-exposed melt pond"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ice-encased meltpond) +# Class: (ice-encased melt pond) AnnotationAssertion(Annotation( "https://phys.org/news/2017-01-arctic-ponds-meltwater-clogs-ice.html") "A melt pond which is completely encased in ice and thus not directly exposed to the atmosphere or underlying water.") +AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "In practice, there may be some openings which are small relative to the surface footprint of the meltpond.") -AnnotationAssertion(rdfs:label "ice-encased meltpond"@en) +AnnotationAssertion(rdfs:label "ice-encased melt pond"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intraglacial lake) @@ -28394,6 +28438,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://www.researchgate.net/publication/258663667_Detection_of_a_subglacial_lake_in_Glacier_de_Tete_Rousse_Mont_Blanc_area_France") Annotation( "https://www.researchgate.net/publication/313281555_Antarctic_subglacial_lakes_drain_through_sediment-floored_canals_Theory_and_model_testing_on_real_and_idealized_domains") "A lake which is comprised of meltwater located underneath or within a glacier.") AnnotationAssertion( "Add axioms to show that this is on the larger side in a size continuum between ice-encased meltponds and intraglacial lakes.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "intraglacial lake"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28403,6 +28448,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation(rdfs:comment "https://en.wikipedia.org/wiki/Deposition_(geology)") "A process during which material entities are added to a landform or to a feature upon the landform.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "depositional process"@en) SubClassOf( ) @@ -28410,6 +28456,7 @@ SubClassOf( "A depositional process during which water vapour is frozen into water ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "ice formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28419,6 +28466,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary/term/new-ice") "An ice formation process during which water is frozen into a form of new ice such as frazil, grease ice, slush, or shuga.") AnnotationAssertion( "Make this class the union of the following processes: frazil ice formation, grease ice formation process, slush formation process, and shuga formation process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "new ice formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28428,6 +28476,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#Formation") "An ice formation process during which seawater is frozen into a sea ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "sea ice formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28437,6 +28486,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") Annotation( "https://nsidc.org/cryosphere/glossary/term/nilas") "A sea ice formation process during which new ice crystals freeze together, forming nilas, a thin, elastic, continuous, ice sheet of a transparent gray color.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "nilas formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28446,6 +28496,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "A sea ice formation process during which water freezes to the bottom of an existing nilas ice floe creating a thicker ice floe known as young ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "young ice formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ))) @@ -28455,6 +28506,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "A sea ice formation process during which seawater freezes onto young ice during the cold season, forming first year ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "First year ice that survives melting during spring and summer can transition to second year ice.") AnnotationAssertion(rdfs:label "first year ice formation process"@en) SubClassOf( ) @@ -28465,6 +28517,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "A sea ice formation process during which seawater freezes onto first year ice during the cold season, forming second year sea ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Second year ice forms from first year ice which has previously survived one melt season.") AnnotationAssertion(rdfs:label "second year ice formation"@en) SubClassOf( ) @@ -28475,6 +28528,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "A sea ice formation process during which seawater freezes into second year ice during the cold season, forming multiyear ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Multiyear ice forms from second year ice which has previously survived at least two melt seasons.") AnnotationAssertion(rdfs:label "multiyear ice formation process"@en) SubClassOf( ) @@ -28485,6 +28539,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation(rdfs:comment "https://nsidc.org/cryosphere/glossary/term/new-ice") "Water ice which is formed from freezing water during a new ice formation process and is suspended in a water body.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "sea ice types include frazil, grease ice, slush, and shuga.") AnnotationAssertion(rdfs:label "new ice"@en) SubClassOf( ) @@ -28496,6 +28551,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://encyclopedia2.thefreedictionary.com/shuga") Annotation( "https://nsidc.org/cryosphere/glossary/term/shuga") "Ice which is formed through the freezing of water in an agitated water body, conferring it spongy, lumpy, and opaque properties.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "shuga"@en) SubClassOf( ) @@ -28503,6 +28559,7 @@ SubClassOf( "https://nsidc.org/cryosphere/glossary/term/ice-floe") "A cohesive sheet of water ice which floats upon the surface of a water body.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Ice floes can exist in sea ice, in rivers or lakes.") AnnotationAssertion(rdfs:label "ice floe"@en) SubClassOf( ) @@ -28513,6 +28570,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary/term/ice-floe") "An ice floe which is formed from frozen sea water, and floats upon the surface of a marine water body.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Ice floes can exist in sea ice, in rivers or lakes.") AnnotationAssertion(rdfs:label "sea ice floe"@en) SubClassOf( ) @@ -28524,6 +28582,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Pancake_ice") Annotation( "https://web.archive.org/web/20040712022508/http://ice-glaces.ec.gc.ca:80/App/WsvPageDsp.cfm?ID=10992&Lang=eng") "A sea ice floe which has a rounded or circular shape and raised rims.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Ice floes can exist in sea ice, in rivers or lakes.") AnnotationAssertion(rdfs:label "pancake ice"@en) SubClassOf( ) @@ -28536,6 +28595,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://encyclopedia2.thefreedictionary.com/nilas") Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") Annotation( "https://nsidc.org/cryosphere/glossary/term/nilas") "A sea ice floe which is thin, elastic, continuous, and of a transparent gray color, which results from the freezing of new ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "nilas"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28549,6 +28609,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "A sea ice floe which is inflexible and thicker then nilas.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "young ice"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28561,6 +28622,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://nsidc.org/arcticseaicenews/tag/first-year-ice/") Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "Sea ice which is thicker than young ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "First year ice that survives a seasonal melting process becomes second year ice.") AnnotationAssertion(rdfs:label "first year ice"@en) SubClassOf( ) @@ -28571,6 +28633,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "Sea ice which is thicker than first year ice, and has survived a seasonal melting process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "second year ice"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28580,6 +28643,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Sea_ice#New_ice.2C_nilas_and_young_ice") "Sea ice which is thicker then second year ice, and has survived more than two seasonal melting process.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "multiyear ice"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28589,6 +28653,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://nsidc.org/cryosphere/glossary/term/grease-ice") "A layer which consists of a thin aggregate of frazil ice crystals, which float upon the surface of a water body.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Within a marine system, grease ice makes the ocean surface resemble an oil slick.") AnnotationAssertion(rdfs:label "grease ice layer"@en) SubClassOf( ) @@ -28607,6 +28672,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Slush") Annotation( "https://nsidc.org/cryosphere/glossary/term/slush") "New ice which is a slurry mixture of frazil, snow and liquid water.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "slush ice"@en) SubClassOf( ) SubClassOf( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -28615,6 +28681,7 @@ SubClassOf( ObjectIntersectionOf(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Slush") "A layer which consists of slush ice.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "slush ice layer"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28624,6 +28691,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A new ice formation process in which slush ice is formed.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "slush formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ))) @@ -28633,6 +28701,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A new ice formation process in which shuga is formed.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "shuga formation process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28650,6 +28719,7 @@ SubClassOf( "https://en.wikipedia.org/wiki/Thermokarst") "A freshwater lake which fills a depression formed by the erosion of thermokarst caused by permafrost thaw.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "cave-in lake") AnnotationAssertion( "thaw lake") AnnotationAssertion(rdfs:comment "Continued thawing of the permafrost substrate can lead to the drainage and eventual disappearance of thermokarst lakes, leaving only the landform, thermokarst depression behind.") @@ -28664,6 +28734,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://www.sciencealert.com/photos-reveal-more-than-200-bright-blue-arctic-lakes-have-started-bubbling-with-methane-gas") "A thermokarst lake through which methane gas released from thawing permafrost, or other methane stores, rises and escapes to the atmosphere.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "On Earth, the bright blue appearance, in the light spectrum visible to humans, is due to increased abundances of microorganisms attracted to sulfur compounds associated with the methane release.") AnnotationAssertion(rdfs:label "methane-releasing thermokarst lake"@en) SubClassOf( ) @@ -28675,6 +28746,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation(rdfs:comment "https://en.wikipedia.org/wiki/Thermokarst") "A geographic basin which is formed due to the erosion of thermokarst by meltwater released from thawing permafrost.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "thermokarst depression"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28684,6 +28756,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Thermokarst") "An irregular land surface which consists of marshy hollows, hummocks, thermokarst depressions and thermokarst lakes formed from the erosion of ice-rich thawing permafrost areas.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Thermokarst is usually found in Arctic or mountainous areas.") AnnotationAssertion(rdfs:label "thermokarst"@en) SubClassOf( ) @@ -28693,6 +28766,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Permafrost") "A process during which permafrost is warmed such that a portion of its constituent water ice is converted into meltwater.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "permafrost thawing process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -28703,6 +28777,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://www.nature.com/news/mysterious-siberian-crater-attributed-to-methane-1.15649") Annotation( "http://www.sciencealert.com/7-000-huge-gas-bubbles-have-formed-under-siberia-and-could-explode-at-any-moment") "Permafrost which contains pockets of trapped methane gas.") AnnotationAssertion( "It would probably be better to assert parthood between the permafrost and cavities filled with gas rather than the gases themselves.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "bulgunyakh") AnnotationAssertion(rdfs:comment "Other hydrocarbon gasses such as carbon dioxide may also be present. These pockets can be sufficently large that the permafrost surface will undulate when pressure is applied.") AnnotationAssertion(rdfs:label "methane-laden permafrost"@en) @@ -28714,6 +28789,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://www.nature.com/news/mysterious-siberian-crater-attributed-to-methane-1.15649") Annotation( "http://www.sciencealert.com/7-000-huge-gas-bubbles-have-formed-under-siberia-and-could-explode-at-any-moment") "A crater which is found in permafrost and formed as a result of an explosion fuelled by methane formerly contained in that permafrost.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "gigantic funnel") AnnotationAssertion(rdfs:label "methane-sourced permafrost crater"@en) SubClassOf( ) @@ -28723,6 +28799,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Explosion") "A process during which a material entity undergoes a rapid increase in volume, releasing gasses and various forms of energy, often including thermal, light and sound energy.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion( "explosion") AnnotationAssertion(rdfs:comment "Supersonic explosions are known as detonations and subsonic explosions as deflagrations.") AnnotationAssertion(rdfs:label "explosion process"@en) @@ -28734,6 +28811,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "http://www.nature.com/news/mysterious-siberian-crater-attributed-to-methane-1.15649") Annotation( "http://www.sciencealert.com/7-000-huge-gas-bubbles-have-formed-under-siberia-and-could-explode-at-any-moment") "An explosion during which methane-rich gas trapped in permafrost combusts.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "permafrost methane explosion"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -28745,6 +28823,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://en.wikipedia.org/wiki/Greenhouse_gas") "A material transport process during which a portion of gaseous environmental material is transported into the atmosphere.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "gas emission process"@en) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectComplementOf(ObjectSomeValuesFrom( ))))) @@ -28754,6 +28833,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://www.epa.gov/ghgemissions/overview-greenhouse-gases") "A gas emission process during which a portion of hydrocarbon gas is transported into the atmosphere.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Some hydrocarbon gasses within the atmosphere contribute to the planetary green house gas effect by increasing absorption of solar energy.") AnnotationAssertion(rdfs:label "hydrocarbon gas emission process"@en) SubClassOf( ) @@ -28764,6 +28844,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(Annotation( "https://www.epa.gov/ghgemissions/overview-greenhouse-gases") "A hydrocarbon gas emission process during which a portion of methane gas is transported into the atmosphere.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "Methane is emitted during the production and transport of coal, natural gas, and oil. Methane emissions also result from livestock and other agricultural practices and by the decay of organic waste in municipal solid waste landfills.") AnnotationAssertion(rdfs:label "methane gas emission process"@en) SubClassOf( ) @@ -28772,6 +28853,7 @@ SubClassOf( "A process during which the intesity of stellar radiation received by a planet's surface varies in a cyclical regime due to the planet's orbital motion around the barycentre of a planetary system and/or the tilt of its rotational axis relative to its orbital plane.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:comment "The seasons that are generated by this process are divisions of time between warm (maximal radiation exposure) and cold (minimum radiation exposure) extremes. Depending on the planet's makeup, the resulting seasonal dynamics may include ecological and meteorological cycles which may form the basis for further divisions of the cycle (e.g. rainy season, dry season, wildfire season).") AnnotationAssertion(rdfs:label "season generating process"@en) SubClassOf( ) @@ -28784,6 +28866,7 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion( "A one-dimensional temporal region which is delimited by the occurrence of processes which serve as its delimiters.") AnnotationAssertion( "Season could be implemented as a subclass of one-dimensional temporal region, however, this will need further thought and discussion with BFO editors.") AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") AnnotationAssertion(rdfs:label "season"@en) SubClassOf( ) @@ -28967,9 +29050,39 @@ AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-3410-4655") AnnotationAssertion(rdfs:comment "Snowpack is found in geographic regions experiencing cold weather for extended periods of time.") AnnotationAssertion(rdfs:label "snowpack"@en) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (channel) + +AnnotationAssertion(Annotation( "https://www.merriam-webster.com/dictionary/channel") "A structure which traverses a mass of one or more environmental materials, and encloses a roughly tubular site.") +AnnotationAssertion( "Intended to be a top level class for wide variety of channel like entities. It’s particulars may change once more subclasses are accumulated.") +AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion(rdfs:label "channel"@en) +SubClassOf( ) + +# Class: (atmosphere and water column exposed melt pond) + +AnnotationAssertion( "A melt pond which spans an ice mass, and is exposed to both the atmosphere and any underlying water.") +AnnotationAssertion( "It would be good to add an axiom such as 'continuous with' some 'water body'.") +AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") +AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") +AnnotationAssertion( "open melt pond") +AnnotationAssertion(rdfs:label "atmosphere and water column exposed melt pond"@en) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (water column exposed melt pond) + +AnnotationAssertion( "A melt pond which is located toward the base of an ice mass and is open to any underlying water.") +AnnotationAssertion( "It would be good to add an axiom such as 'continuous with' some 'water body'.") +AnnotationAssertion( "http://orcid.org/0000-0001-5812-6405") +AnnotationAssertion( "http://orcid.org/0000-0002-3410-4655") +AnnotationAssertion( "http://orcid.org/0000-0002-4366-3088") +AnnotationAssertion(rdfs:label "water column exposed melt pond"@en) +SubClassOf( ) + # Class: (axilla skin environment) AnnotationAssertion(Annotation( "GOC:TermGenie"^^xsd:string) "An environment that is determined by an axilla skin."^^xsd:string) @@ -29204,6 +29317,7 @@ AnnotationAssertion(rdfs:label " SubObjectPropertyOf(ObjectPropertyChain( ) ) AnnotationAssertion(rdfs:label "editor preferred term~editor preferred label") AnnotationAssertion(rdfs:label "has curation status") +AnnotationAssertion(rdfs:label "definition source") AnnotationAssertion(rdfs:label "imported from") AnnotationAssertion(rdfs:label "expand expression to") AnnotationAssertion( "An assertion that holds between an OWL Object Property and a temporal interpretation that elucidates how OWL Class Axioms that use this property are to be interpreted in a temporal context.")