Simplitigs - supplementary

Introduction

Here we provide data and pipelines for the paper Simplitigs as an efficient and scalable representation of de Bruijn graphs.

Citation

Břinda K, Baym M, Kucherov G. Simplitigs as an efficient and scalable representation of de Bruijn graphs. Genome Biology 22(96), 2021; doi: https://doi.org/10.1186/s13059-021-02297-z

@article{brinda2021-simplitigs,
  title   = { Simplitigs as an efficient and scalable representation of de {Bruijn} graphs },
  author  = { Karel B{\v r}inda and Michael Baym and Gregory Kucherov },
  journal = { Genome Biology },
  volume  = { 22 },
  number  = { 96 },
  year    = { 2021 },
  doi     = { 10.1186/s13059-021-02297-z }
}

Content

• experiments/ - pipelines and scripts for individual experiments
• figures/ - scripts to plot figures and generate additional data files

License

MIT