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picard
picard PublicForked from broadinstitute/picard
A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.github.io/hts-specs) format.
Java
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PipelinesSupport
PipelinesSupport PublicForked from broadinstitute/PipelinesSupport
A repo to contain files that support Broad processing pipelines.
Shell
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dcp-community
dcp-community PublicForked from HumanCellAtlas/dcp-community
HCA Data Coordination Platform community content
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broad-prod-wgs-germline-snps-indels
broad-prod-wgs-germline-snps-indels PublicForked from gatk-workflows/broad-prod-wgs-germline-snps-indels
Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://github.com/gatk-workflows/five-dollar-genome-analysis-pipeline
WDL
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