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Source files for a paper about genotype diagnostics in diversity outbred mice
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LaTeX
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.gitignore
LICENSE.md
Makefile
ReadMe.md
genetics.bst
mpp_diag.Rnw
mpp_diag.bib

ReadMe.md

Cleaning genotype data from Diversity Outbred mice

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Files for a paper on genotype diagnostics for Diversity Outbred mice, focusing on SNPs from MegaMUGA arrays, to appear in G3, doi:10.1534/g3.119.400165.

The raw data need to be downloaded separately from FigShare:

R packages needed to compile the paper:

For R/diagnostics.Rmd, you will also need:

Current PDF of the paper at https://www.biostat.wisc.edu/~kbroman/publications/mpp_diag.pdf


License

This manuscript is licensed under CC BY.

CC BY

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