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README.md

Mapping QTL in BXD mice using R/qtl2

Jupyter notebook: Binder

RStudio: Binder

This is a short tutorial on QTL analysis in the BXD mouse recombinant inbred lines using R/qtl2, to be presented at the Complex Trait Community meeting in San Diego on 9 June 2019.

The goal is to demonstrate

It's presented both as a Jupyter notebook and as R Markdown. The compiled R Markdown file is at https://kbroman.org/Teaching_CTC2019/CTC2019_tutorial.html.

Live versions of the Jupyter notebook, or of RStudio with appropriate packages installed, are available via the above binder badges.


To the extent possible under law, Karl Broman has waived all copyright and related or neighboring rights to “Mapping QTL in BXD mice using R/qtl2”. This work is published from the United States.
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Materials for R/qtl2 tutorial for CTC 2019

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