ValueError:No closing quotation #29

darked89 opened this Issue May 3, 2012 · 2 comments


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3 participants

darked89 commented May 3, 2012

I run:

command = """samtools mpileup foobar.bam -r '1|FR0001.1:100000-100500' """"
r =

File "", line 1, in
File "build/bdist.linux-x86_64/egg/envoy/", line 162, in run
File "build/bdist.linux-x86_64/egg/envoy/", line 151, in expand_args
File "/users/rg/dkedra/soft/lib/python2.7/", line 279, in split
return list(lex)
File "/users/rg/dkedra/soft/lib/python2.7/", line 269, in next
token = self.get_token()
File "/users/rg/dkedra/soft/lib/python2.7/", line 96, in get_token
raw = self.read_token()
File "/users/rg/dkedra/soft/lib/python2.7/", line 172, in read_token
raise ValueError, "No closing quotation"

Command by itself works from a shell command line.

Thanks for your help

Darek Kedra

ibeex commented Oct 11, 2012

this is related to #27


This project is in a bit of a crisis state — it's really useful, and I use it on a daily basis. However, I wrote it in a few afternoons several years ago and haven't touched it since. In order to get the project into a stable state I'm closing all issues and pull requests

Don't take this as aggressive — it's just necessary for the project to make any progress any time soon (it's pretty clear the project is effectively unmaintained at the moment). Great things to come! Please watch the GitHub logs and feel free to re-open this discussion soon. I just need to really it into a good state first.


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