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Pinned

  1. Workflow to identify active transcription factors from CAGE-seq data.

    Nextflow 1

  2. Pipeline for hybrid assembly using short and long reads.

    Nextflow 2 2

  3. nf-core cageseq pipeline

    Nextflow 2 1

  4. Implementation of a varietional autoencoder model

    Python

  5. R package for analysis of NanoString data

    R 1

268 contributions in the last year

Apr May Jun Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr Mon Wed Fri

Contribution activity

April 2019

Created a pull request in nf-core/nf-co.re that received 2 comments

Added svgs and yaml entry for DZNE

Added color and white SVGs and entry in the yaml file for DZNE as contributor (CAGE-seq pipeline)

+136 −0 2 comments

Opened their first pull request on GitHub in nf-core/test-datasets

Kevin Menden created their first pull request!

First pull request

Added test data for cageseq

Created an issue in nf-core/tools that received 27 comments

Linting doesn't find conda-forge channels

Hi, when running 'nf-core lint', several packages are listed as unknown versions, even though there are available from the given channels. Example: E…

27 comments
1 contribution in private repositories Apr 9

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