DDR-eVOLVER-model

Scripts for executing eVOLVER experiments and ecology simulations to study diversity-disturbance relationships in bioreactors.

Publication: Christopher P. Mancuso, Hyunseok Lee, Clare I. Abreu, Jeff Gore, Ahmad S. Khalil. eLife 2021;10:e67175. DOI: https://doi.org/10.7554/eLife.67175

eVOLVER:

1. DDR64: Scripts and real-time generated data from DDR64 experiment
2. DDRWO: Scripts and real-time generated data from DDR Washout experiment NOTE: While functional, these scripts are out of date, and current versions of eVOLVER code should be accessed at https://github.com/FYNCH-BIO

Simulation Code:

3. DDR_Simulator: Monod consumer resource, linear consumer resource, and lotka volterra simulations contained in Jupyter Notebook

Authors: Christopher Mancuso, Hyunseok Lee, Clare Abreu