Universal gut microbial relationships in the gut microbiome of wild baboons

Fitting models

Fitted model output has been omitted from this repository for file size considerations but is available upon request. The fido::basset model can be fit to the filtered 16S data using the script analysis_fit_model.R.

Recapitulating figures

Code for figure generation and supporting analysis is in files labeled main_*.R and supplement_*.R.