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Rename "qualitative" to "quantitative" everywhere

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1 parent 46b4bd1 commit 6801726303e9affc8880eb25142396e9a4b807af @kimrutherford committed Apr 3, 2013
Showing with 5 additions and 5 deletions.
  1. +1 −1 etc/load-all.sh
  2. +3 −3 lib/PomBase/Import/{Qualitative.pm → Quantitative.pm}
  3. +1 −1 script/pombase-import.pl
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2 etc/load-all.sh
@@ -99,7 +99,7 @@ echo load quantitative gene expression data
for file in /var/pomcur/sources/quantitative_gene_expression/*
do
echo loading: $i
- ./script/pombase-import.pl load-chado.yaml qualitative --organism_taxonid=9606 $HOST $DB $USER $PASSWORD < $file 2>&1 | tee $LOG_DIR/$log_file.qualitative
+ ./script/pombase-import.pl load-chado.yaml quantitative --organism_taxonid=9606 $HOST $DB $USER $PASSWORD < $file 2>&1 | tee $LOG_DIR/$log_file.qualitative
done
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6 lib/PomBase/Import/Qualitative.pm → lib/PomBase/Import/Quantitative.pm
@@ -1,8 +1,8 @@
-package PomBase::Import::Qualitative;
+package PomBase::Import::Quantitative;
=head1 NAME
-PomBase::Import::Qualitative - Import qualitative gene expression data
+PomBase::Import::Quantitative - Import quantitative gene expression data
=head1 SYNOPSIS
@@ -18,7 +18,7 @@ Please report any bugs or feature requests to C<kmr44@cam.ac.uk>.
You can find documentation for this module with the perldoc command.
- perldoc PomBase::Import::Qualitative
+ perldoc PomBase::Import::Quantitative
=over 4
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2 script/pombase-import.pl
@@ -88,7 +88,7 @@ sub usage
gaf => 'PomBase::Import::GeneAssociationFile',
pomcur => 'PomBase::Import::PomCur',
orthologs => 'PomBase::Import::Orthologs',
- qualitative => 'PomBase::Import::Qualitative',
+ quantitative => 'PomBase::Import::Quantitative',
);
my $import_module = $import_modules{$import_type};

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