{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":586895190,"defaultBranch":"main","name":"deeptangle","ownerLogin":"kirkegaardlab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-01-09T13:39:38.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/122284136?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1710454942.0","currentOid":""},"activityList":{"items":[{"before":"80c1c065e2dd7b1f70e5de9281c647d2e11d7337","after":"484bc3b54fbce750a4d3e5d672d4dbbde40a8f31","ref":"refs/heads/main","pushedAt":"2024-06-01T09:26:26.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"alonfnt","name":"Albert Alonso","path":"/alonfnt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/38870744?s=80&v=4"},"commit":{"message":"Merge pull request #15 from kirkegaardlab/fix_jax_deprecation\n\nfix: replace deprecated jax.numpy.trapz","shortMessageHtmlLink":"Merge pull request #15 from kirkegaardlab/fix_jax_deprecation"}},{"before":"81098aca9f6b4671428bfc30e405fd1f2da92170","after":"16a6c3859aee847818443d50b26032db02e265c6","ref":"refs/heads/fix_jax_deprecation","pushedAt":"2024-03-14T23:57:02.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"alonfnt","name":"Albert Alonso","path":"/alonfnt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/38870744?s=80&v=4"},"commit":{"message":"build: fix packages versions and scikit-version\n\nPackages requiere newer Python versions than 3.8.\nBut some packages are old and use deprecated features (scikit-video),\nso I added a quick fix. Ideally I fix it at some point.\nSome versions on requirements are also more clearly specified, as there\nare other deprecations.","shortMessageHtmlLink":"build: fix packages versions and scikit-version"}},{"before":"75bddf515891e50d2b0d312c782199eb90218db2","after":"81098aca9f6b4671428bfc30e405fd1f2da92170","ref":"refs/heads/fix_jax_deprecation","pushedAt":"2024-03-14T23:40:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"alonfnt","name":"Albert Alonso","path":"/alonfnt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/38870744?s=80&v=4"},"commit":{"message":"build: fix packages versions and scikit-version\n\nPackages requiere newer Python versions than 3.8.\nBut some packages are old and use deprecated features (scikit-video),\nso I added a quick fix. Ideally I fix it at some point.\nSome versions on requirements are also more clearly specified, as there\nare other deprecations.","shortMessageHtmlLink":"build: fix packages versions and scikit-version"}},{"before":null,"after":"75bddf515891e50d2b0d312c782199eb90218db2","ref":"refs/heads/fix_jax_deprecation","pushedAt":"2024-03-14T22:22:22.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"alonfnt","name":"Albert Alonso","path":"/alonfnt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/38870744?s=80&v=4"},"commit":{"message":"fix: replace deprecated jax.numpy.trapz\n\nApparently in the 0.4.16 JAX release, there were several deprecations\nfollowing NEP52\n(https://numpy.org/neps/nep-0052-python-api-cleanup.html)\nOne of those was jax.numpy.trapz. Instead we are meant to use\njax.scipy.integrate.trapozoid.\n\nThe C. Elegans code used trapz so it is not running on the current\nversion.","shortMessageHtmlLink":"fix: replace deprecated jax.numpy.trapz"}},{"before":"29299f3faa158e5f7097d410a253cd342cef1702","after":"80c1c065e2dd7b1f70e5de9281c647d2e11d7337","ref":"refs/heads/main","pushedAt":"2023-12-15T12:21:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"juliusbierk","name":"Julius Bier Kirkegaard","path":"/juliusbierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1892174?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"85cee4c3d361234d838391f5cc164b3c879106a5","after":"29299f3faa158e5f7097d410a253cd342cef1702","ref":"refs/heads/main","pushedAt":"2023-12-15T12:21:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"juliusbierk","name":"Julius Bier Kirkegaard","path":"/juliusbierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1892174?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"e079e7fd5d5a1fa2260e100d3cfc43b3e1a6401e","after":"85cee4c3d361234d838391f5cc164b3c879106a5","ref":"refs/heads/main","pushedAt":"2023-12-15T12:20:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"juliusbierk","name":"Julius Bier Kirkegaard","path":"/juliusbierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1892174?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"dafddc66806fde0cd243305a0755f4f3c1a2d078","after":"e079e7fd5d5a1fa2260e100d3cfc43b3e1a6401e","ref":"refs/heads/main","pushedAt":"2023-07-27T19:57:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"alonfnt","name":"Albert Alonso","path":"/alonfnt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/38870744?s=80&v=4"},"commit":{"message":"add badges linking to the papers url","shortMessageHtmlLink":"add badges linking to the papers url"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEWacGtgA","startCursor":null,"endCursor":null}},"title":"Activity ยท kirkegaardlab/deeptangle"}