Publication quality maps using Earth Engine and Cartopy
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
cartoee
docs
paper
.travis.yml
AUTHORS.rst
CONTRIBUTING.rst
LICENSE
README.md
environment.yml
readthedocs.yml
requirements.txt
setup.py

README.md

cartoee

PyPI version Build Status Documentation Status DOI License: GPL v3 status

Publication quality maps using Earth Engine and Cartopy! alt-text

Installation

cartoee is available to install via pip. To install the package, you can use pip install for your Python environment:

pip install cartoee

Or, you can install the package manually from source code using the following commands:

git clone https://github.com/kmarkert/cartoee.git
cd cartoee
python setup.py install

Please see the documentation for instructions on installing dependencies.

Working with cartoee

cartoee aims to do only one thing well: getting processing results from Earth Engine into a publication quality mapping interface. cartoee simply gets results from Earth Engine and plots it with the correct geographic projections leaving ee and cartopy to do more of the processing and visualization.

A simple case

Here is what a simple workflow looks like to visualize SRTM data on a map:

import cartoee as cee
import ee

ee.Initialize()

# get an earth engine image
srtm = ee.Image("CGIAR/SRTM90_V4")

# plot the result using cartoee
ax = cee.getMap(srtm,region=[-180,-90,180,90],visParams={'min':0,'max':3000})

ax.coastlines()
plt.show()

alt-text

Now that we have our EE image as a cartopy/matplotlib object, we can start styling our plot for the publication using the cartopy API.

import cartopy.crs as ccrs
from cartopy.mpl.gridliner import LATITUDE_FORMATTER, LONGITUDE_FORMATTER

# set gridlines and spacing
xticks = [-180,-120,-60,0,60,120,180]
yticks = [-90,-60,-30,0,30,60,90]
ax.gridlines(xlocs=xticks, ylocs=yticks,linestyle='--')

# set custom formatting for the tick labels
ax.xaxis.set_major_formatter(LONGITUDE_FORMATTER)
ax.yaxis.set_major_formatter(LATITUDE_FORMATTER)

# set tick labels
ax.set_xticks([-180,-120,-60, 0, 60, 120, 180], crs=ccrs.PlateCarree())
ax.set_yticks([-90, -60, -30, 0, 30, 60, 90], crs=ccrs.PlateCarree())

alt-text

Doing more...

Now that we have a grasp on a simple example, we can use Earth Engine to to some processing and make a pretty map.

# function to add NDVI band to imagery
def calc_ndvi(img):
    ndvi = img.normalizedDifference(['Nadir_Reflectance_Band2','Nadir_Reflectance_Band1'])
    return img.addBands(ndvi.rename('ndvi'))

# MODIS Nadir BRDF-Adjusted Reflectance with NDVI band
modis = ee.ImageCollection('MODIS/006/MCD43A4')\
        .filterDate('2010-01-01','2016-01-01')\
        .map(calc_ndvi)

# get the cartopy map with EE results
ax = cee.getMap(modis.mean(),cmap='YlGn'
    visParams={'min':-0.5,'max':0.85,'bands':'ndvi',},
    region=[-180,-90,180,90])

ax.coastlines()

cb = cee.addColorbar(ax,loc='right',cmap='YlGn',visParams={'min':0,'max':1,'bands':'ndvi'})

alt-text

You can see from the example that we calculated NDVI on MODIS imagery from 2010-2015 and created a global map with the mean value per pixel.

What if we want to make multiple maps with some different projections? We can do that by creating our figure and supplying the axes to plot on.

# get land mass feature collection
land = ee.FeatureCollection('USDOS/LSIB_SIMPLE/2017')

# get seasonal averages and clip to land features
djf = modis.filter(ee.Filter.calendarRange(12,3,'month')).mean().clip(land)
mam = modis.filter(ee.Filter.calendarRange(3,6,'month')).mean().clip(land)
jja = modis.filter(ee.Filter.calendarRange(6,9,'month')).mean().clip(land)
son = modis.filter(ee.Filter.calendarRange(9,12,'month')).mean().clip(land)

fig,ax = plt.subplots(ncols=2,nrows=2,subplot_kw={'projection': ccrs.Orthographic(-80,35)})

imgs = np.array([[djf,mam],[jja,son]])
titles = np.array([['DJF','MAM'],['JJA','SON']])

for i in range(len(imgs)):
    for j in range(len(imgs[i])):
        ax[i,j] = cee.addLayer(imgs[i,j],ax=ax[i,j],
                               region=bbox,dims=500,
                               visParams=ndviVis,cmap='YlGn'
                              )
        ax[i,j].coastlines()
        ax[i,j].gridlines(linestyle='--')
        ax[i,j].set_title(titles[i,j])

cax = fig.add_axes([0.9, 0.2, 0.02, 0.6])
cb = cee.addColorbar(ax[i,j],cax=cax,cmap='YlGn',visParams=ndviVis)

alt-text

To see more examples, go to the documentation at https://cartoee.readthedocs.io!