fMRI_Multiverse Shiny App

This repository contains the code for the METEOR shiny app accompanying this paper The online version of the app is available here

Overview

This Shiny app is designed to visualize the analytical choices in fMRI studies using graph theoretical approach.

Installation

To run this app locally, you will need to have R installed on your machine. You can download R here.

You will also need to install the shiny package and other required packages in R, which you can do by running the following command in your R console:

install.packages("shiny")
install.packages(c('shiny', 'networkD3', 'dplyr', 'igraph', 'visNetwork', 'stringr', 'png', 'shinyjs', 'DT', 'rintrojs', 'ggplot2', 'qdapTools', 'RColorBrewer', 'forcats', 'readxl', 'shinyWidgets', 'tibble', 'htmlwidgets', 'ggtext'))

Running the App

You can run the app via GitHUb

shiny::runGitHub("fMRI_Multiverse", "kristantodan12")

Running the App with Docker

For sustainability, we also shared the app in the form of a Docker image that can be accessed at:

docker pull danielkris12/brain_behav:fmri_mva_try
docker run -p 3838:3838 danielkris12/brain_behav:fmri_mva_try