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| strain date country pango_lineage clade_membership division region genbank_accession author | ||
| USA/MD-CDC-ASC210277356/2021 2021-08-05 USA B 19A Maryland North America OK079939 Howard et al C | ||
| GHA/1651_S3/2020 2020-03-25 Ghana A.11 19B Ghana Africa MT890220 Ngoi et al | ||
| England/MILK-1567218/2021 2021-05-08 United Kingdom B.1.620 20A England Europe OU278597 The Lighthouse Lab in Milton et al A | ||
| Estonia/Cov0319/2020 2020-09-17 Estonia B.1.1.10 20B Estonia Europe OU278317 Avi et al | ||
| Iceland/1173/2020 2020-03-30 Iceland B.1 20C Iceland Europe OU181114 Jonsson et al A | ||
| EGY/CUNCI-HGC09I030/2020 2020-12-25 Egypt C.36 20D Egypt Africa MW547502 Zekri et al | ||
| NZL/20CV0589/2020 2020-11-18 New Zealand B.1.177.51 20E (EU1) Auckland Oceania OK426660 Ren et al | ||
| AUS/VIC3454/2020 2020-07-05 Australia D.2 20F Victoria Oceania MT972589 Sait et al C | ||
| USA/JDYI/2020 2020-10-27 USA B.1.2 20G Alabama North America MW923885 Grimwood et al | ||
| FRA/IHUCOVID-036058-NovaE/2021 2021-04-09 France B.1.351.2 20H (Beta, V2) France Europe ON279241 Levasseur et al B | ||
| England/MILK-BDC2A2/2020 2020-11-26 United Kingdom B.1.1.7 20I (Alpha, V1) England Europe OD905376 The Lighthouse Lab in Milton et al B | ||
| BRA/PR-NVBS936GENOV827686254257/2021 2021-06-09 Brazil P.1 20J (Gamma, V3) Brazil South America ON577540 Guarischi et al | ||
| USA/CA-CDC-QDX26400331/2021 2021-06-28 USA B.1.617.2 21A (Delta) California North America MZ590769 Howard et al R | ||
| England/MILK-1564EF9/2021 2021-05-07 United Kingdom B.1.617.1 21B (Kappa) England Europe OU279226 The Lighthouse Lab in Milton et al A | ||
| USA/CA-CZB-22906/2021 2021-01-04 USA B.1.429 21C (Epsilon) California North America MW701160 Consortium et al | ||
| England/CAMC-1395ED3/2021 2021-03-03 United Kingdom B.1.525 21D (Eta) England Europe OU054628 Howes et al A | ||
| USA/GU-CDC-2-3906074/2021 2021-01-31 USA P.3 21E (Theta) Guam North America MZ779587 Sheth et al C | ||
| USA/NY-CDC-LC0031214/2021 2021-03-15 USA B.1.526 21F (Iota) New York North America MW987419 Howard et al Z | ||
| Switzerland/ZH-UZH-IMV-3ba4d945/2021 2021-08-02 Switzerland C.37.1 21G (Lambda) Zürich Europe OU576905 ? F | ||
| USA/FL-CDC-FG-022848/2021 2021-04-12 USA B.1.621 21H (Mu) Florida North America OK213902 Howard et al AQ | ||
| England/MILK-1622A3E/2021 2021-06-03 United Kingdom AY.11 21I (Delta) England Europe OU314327 The Lighthouse Lab in Milton et al A | ||
| USA/FL-CDC-QDX26157271/2021 2021-06-22 USA AY.75 21I (Delta) Florida North America MZ535087 Howard et al S | ||
| USA/TX-CDC-ASC210111920/2021 2021-07-07 USA AY.44 21J (Delta) Texas North America MZ705780 Howard et al Q | ||
| England/QEUH-173F5F0/2021 2021-06-18 United Kingdom AY.4 21J (Delta) England Europe OU358465 VanSteenhouse et al A | ||
| Switzerland/AG-ETHZ-35947998/2022 2022-01-23 Switzerland BA.1.1 21K (Omicron) Aargau Europe OV882645 ? G | ||
| USA/GA-GPHL-2867/2021 2021-12-27 USA BA.1.1.18 21K (Omicron) Georgia North America OM201100 Parrott et al | ||
| Denmark/DCGC-323445/2022 2022-01-15 Denmark BA.2 21L (Omicron) Hovedstaden Europe OW783991 Danish Covid-19 Genome et al | ||
| USA/NY-Broad-CRSP_JYXB4KKAEDIB5CUN/2022 2022-03-07 USA BA.2.7 21L (Omicron) New York North America ON066513 Lemieux et al G | ||
| USA/PA-CDC-QDX34289597/2022 2022-02-25 USA BA.3.1 21M (Omicron) Pennsylvania North America OM998782 Howard et al BM | ||
| USA/NC-CDC-LC0597531/2022 2022-04-22 USA BA.4 22A (Omicron) North Carolina North America ON465569 Howard et al CK | ||
| USA/CA-CDC-LC0603479/2022 2022-04-29 USA BA.4 22A (Omicron) California North America ON468185 Howard et al CO | ||
| USA/FL-BPHL-8585/2022 2022-05-12 USA BA.5 22B (Omicron) Florida North America ON729631 Schmedes et al D | ||
| BHR/22920323375_S6_L001/2022 2022-05-11 Bahrain BA.5 22B (Omicron) Bahrain Asia ON627314 Marhoon et al A | ||
| USA/VT-Broad-CRSP_HCJQO5WTVP7AY6KK/2022 2022-03-28 USA BA.2.12.1 22C (Omicron) Vermont North America ON199482 Lemieux et al H | ||
| USA/RI-CDC-LC0586837/2022 2022-04-13 USA BA.2.12.1 22C (Omicron) Rhode Island North America ON395248 Howard et al BZ | ||
| FRA/IHUMI-6070VR/2022 2022-02-09 France XD Europe OM990739.1 NA | ||
| FRA/IHUCOVID-64762/2022 2022-02-09 France XD Europe OM990851.1 NA | ||
| England/MILK-3729AD6/2022 2022-02-16 England XE Europe OW016842.1 NA | ||
| England/BRBR-3899D04/2022 2022-02-27 England XE Europe OW137497.1 NA | ||
| England/MILK-36E1AF9/2022 2022-02-14 England XF Europe OW002725.1 NA | ||
| England/MILK-327F0C5/2022 2022-01-14 England XF Europe OV738853.1 NA | ||
| England/MILK-3795589/2022 2022-02-19 England XG Europe OW091023.1 NA | ||
| Scotland/QEUH-37E04A0/2022 2022-02-21 Scotland XG Europe OW084783.1 NA | ||
| England/MILK-37D141B/2022 2022-02-20 England XH Europe OW042525.1 NA | ||
| England/MILK-385C31A/2022 2022-02-24 England XH Europe OW126705.1 NA | ||
| England/MILK-393A26F/2022 2022-03-04 England XJ Europe OW197337.1 NA | ||
| England/MILK-3BFC759/2022 2022-03-23 England XL Europe OW360896.1 NA | ||
| England/LSPA-3CC763B/2022 2022-03-28 England XL Europe OW490144.1 NA | ||
| USA/NY-Broad-CRSP_WH5TJZ42BYV4BC3T/2022 2022-03-28 USA XM North America ON199453.1 NA | ||
| England/MILK-3796834/2022 2022-02-19 England XM Europe OW090848.1 NA | ||
| England/LSPA-3B89478/2022 2022-03-20 England XN Europe OW322926.1 NA | ||
| England/MILK-3B62C6E/2022 2022-03-19 England XN Europe OW320124.1 NA | ||
| Wales/LSPA-3A9969E/2022 2022-03-13 Wales XR Europe OW286587.1 NA | ||
| England/LSPA-3B0E8AC/2022 2022-03-15 England XR Europe OW288317.1 NA | ||
| Scotland/QEUH-38D11C8/2022 2022-03-02 Scotland XP Europe OW159779.1 NA | ||
| Scotland/QEUH-38CEA2D/2022 2022-03-02 Scotland XP Europe OW156660.1 NA | ||
| USA/OH-CDC-MMB14658183/2022 2022-03-07 USA XS North America OM981060.1 NA | ||
| USA/CO-CDC-FG-248528/2022 2022-01-19 USA XS North America OM477123.1 NA | ||
| England/MILK-38AA91B/2022 2022-02-28 England XQ Europe OW192527.1 NA | ||
| England/LSPA-3943EF6/2022 2022-03-05 England XQ Europe OW142543.1 NA | ||
| strain date country pango_lineage clade_membership division region genbank_accession author dataset | ||
| USA/MD-CDC-ASC210277356/2021 2021-08-05 USA B 19A Maryland North America OK079939.1 Howard et al C controls-negative | ||
| GHA/1651_S3/2020 2020-03-25 Ghana A.11 19B Ghana Africa MT890220.1 Ngoi et al controls-negative | ||
| England/MILK-1567218/2021 2021-05-08 United Kingdom B.1.620 20A England Europe OU278597.1 The Lighthouse Lab in Milton et al A controls-negative | ||
| Estonia/Cov0319/2020 2020-09-17 Estonia B.1.1.10 20B Estonia Europe OU278317.1 Avi et al controls-negative | ||
| Iceland/1173/2020 2020-03-30 Iceland B.1 20C Iceland Europe OU181114.1 Jonsson et al A controls-negative | ||
| EGY/CUNCI-HGC09I030/2020 2020-12-25 Egypt C.36 20D Egypt Africa MW547502.1 Zekri et al controls-negative | ||
| NZL/20CV0589/2020 2020-11-18 New Zealand B.1.177.51 20E (EU1) Auckland Oceania OK426660.1 Ren et al controls-negative | ||
| AUS/VIC3454/2020 2020-07-05 Australia D.2 20F Victoria Oceania MT972589.1 Sait et al C controls-negative | ||
| USA/JDYI/2020 2020-10-27 USA B.1.2 20G Alabama North America MW923885.1 Grimwood et al controls-negative | ||
| FRA/IHUCOVID-036058-NovaE/2021 2021-04-09 France B.1.351.2 20H (Beta, V2) France Europe ON279241.1 Levasseur et al B controls-negative | ||
| England/MILK-BDC2A2/2020 2020-11-26 United Kingdom B.1.1.7 20I (Alpha, V1) England Europe OD905376.1 The Lighthouse Lab in Milton et al B controls-negative | ||
| BRA/PR-NVBS936GENOV827686254257/2021 2021-06-09 Brazil P.1 20J (Gamma, V3) Brazil South America ON577540.1 Guarischi et al controls-negative | ||
| USA/CA-CDC-QDX26400331/2021 2021-06-28 USA B.1.617.2 21A (Delta) California North America MZ590769.1 Howard et al R controls-negative | ||
| England/MILK-1564EF9/2021 2021-05-07 United Kingdom B.1.617.1 21B (Kappa) England Europe OU279226.1 The Lighthouse Lab in Milton et al A controls-negative | ||
| USA/CA-CZB-22906/2021 2021-01-04 USA B.1.429 21C (Epsilon) California North America MW701160.1 Consortium et al controls-negative | ||
| England/CAMC-1395ED3/2021 2021-03-03 United Kingdom B.1.525 21D (Eta) England Europe OU054628.1 Howes et al A controls-negative | ||
| USA/GU-CDC-2-3906074/2021 2021-01-31 USA P.3 21E (Theta) Guam North America MZ779587.1 Sheth et al C controls-negative | ||
| USA/NY-CDC-LC0031214/2021 2021-03-15 USA B.1.526 21F (Iota) New York North America MW987419.1 Howard et al Z controls-negative | ||
| Switzerland/ZH-UZH-IMV-3ba4d945/2021 2021-08-02 Switzerland C.37.1 21G (Lambda) Zürich Europe OU576905.1 ? F controls-negative | ||
| USA/FL-CDC-FG-022848/2021 2021-04-12 USA B.1.621 21H (Mu) Florida North America OK213902.1 Howard et al AQ controls-negative | ||
| England/MILK-1622A3E/2021 2021-06-03 United Kingdom AY.11 21I (Delta) England Europe OU314327.1 The Lighthouse Lab in Milton et al A controls-negative | ||
| USA/FL-CDC-QDX26157271/2021 2021-06-22 USA AY.75 21I (Delta) Florida North America MZ535087.1 Howard et al S controls-negative | ||
| USA/TX-CDC-ASC210111920/2021 2021-07-07 USA AY.44 21J (Delta) Texas North America MZ705780.1 Howard et al Q controls-negative | ||
| England/QEUH-173F5F0/2021 2021-06-18 United Kingdom AY.4 21J (Delta) England Europe OU358465.1 VanSteenhouse et al A controls-negative | ||
| Switzerland/AG-ETHZ-35947998/2022 2022-01-23 Switzerland BA.1.1 21K (Omicron) Aargau Europe OV882645.1 ? G controls-negative | ||
| USA/GA-GPHL-2867/2021 2021-12-27 USA BA.1.1.18 21K (Omicron) Georgia North America OM201100.1 Parrott et al controls-negative | ||
| Denmark/DCGC-323445/2022 2022-01-15 Denmark BA.2 21L (Omicron) Hovedstaden Europe OW783991.1 Danish Covid-19 Genome et al controls-negative | ||
| USA/NY-Broad-CRSP_JYXB4KKAEDIB5CUN/2022 2022-03-07 USA BA.2.7 21L (Omicron) New York North America ON066513.1 Lemieux et al G controls-negative | ||
| USA/PA-CDC-QDX34289597/2022 2022-02-25 USA BA.3.1 21M (Omicron) Pennsylvania North America OM998782.1 Howard et al BM controls-negative | ||
| USA/NC-CDC-LC0597531/2022 2022-04-22 USA BA.4 22A (Omicron) North Carolina North America ON465569.1 Howard et al CK controls-negative | ||
| USA/CA-CDC-LC0603479/2022 2022-04-29 USA BA.4 22A (Omicron) California North America ON468185.1 Howard et al CO controls-negative | ||
| USA/FL-BPHL-8585/2022 2022-05-12 USA BA.5 22B (Omicron) Florida North America ON729631.1 Schmedes et al D controls-negative | ||
| BHR/22920323375_S6_L001/2022 2022-05-11 Bahrain BA.5 22B (Omicron) Bahrain Asia ON627314.1 Marhoon et al A controls-negative | ||
| USA/VT-Broad-CRSP_HCJQO5WTVP7AY6KK/2022 2022-03-28 USA BA.2.12.1 22C (Omicron) Vermont North America ON199482.1 Lemieux et al H controls-negative | ||
| USA/RI-CDC-LC0586837/2022 2022-04-13 USA BA.2.12.1 22C (Omicron) Rhode Island North America ON395248.1 Howard et al BZ controls-negative | ||
| FRA/IHUMI-6070VR/2022 2022-02-09 France XD Europe OM990739.1 NA controls-positive | ||
| FRA/IHUCOVID-64762/2022 2022-02-09 France XD Europe OM990851.1 NA controls-positive | ||
| England/MILK-3729AD6/2022 2022-02-16 England XE Europe OW016842.1 NA controls-positive | ||
| England/BRBR-3899D04/2022 2022-02-27 England XE Europe OW137497.1 NA controls-positive | ||
| England/MILK-36E1AF9/2022 2022-02-14 England XF Europe OW002725.1 NA controls-positive | ||
| England/MILK-327F0C5/2022 2022-01-14 England XF Europe OV738853.1 NA controls-positive | ||
| England/MILK-3795589/2022 2022-02-19 England XG Europe OW091023.1 NA controls-positive | ||
| Scotland/QEUH-37E04A0/2022 2022-02-21 Scotland XG Europe OW084783.1 NA controls-positive | ||
| England/MILK-37D141B/2022 2022-02-20 England XH Europe OW042525.1 NA controls-positive | ||
| England/MILK-385C31A/2022 2022-02-24 England XH Europe OW126705.1 NA controls-positive | ||
| England/MILK-393A26F/2022 2022-03-04 England XJ Europe OW197337.1 NA controls-positive | ||
| England/MILK-3BFC759/2022 2022-03-23 England XL Europe OW360896.1 NA controls-positive | ||
| England/LSPA-3CC763B/2022 2022-03-28 England XL Europe OW490144.1 NA controls-positive | ||
| USA/NY-Broad-CRSP_WH5TJZ42BYV4BC3T/2022 2022-03-28 USA XM North America ON199453.1 NA controls-positive | ||
| England/MILK-3796834/2022 2022-02-19 England XM Europe OW090848.1 NA controls-positive | ||
| England/LSPA-3B89478/2022 2022-03-20 England XN Europe OW322926.1 NA controls-positive | ||
| England/MILK-3B62C6E/2022 2022-03-19 England XN Europe OW320124.1 NA controls-positive | ||
| Wales/LSPA-3A9969E/2022 2022-03-13 Wales XR Europe OW286587.1 NA controls-positive | ||
| England/LSPA-3B0E8AC/2022 2022-03-15 England XR Europe OW288317.1 NA controls-positive | ||
| Scotland/QEUH-38D11C8/2022 2022-03-02 Scotland XP Europe OW159779.1 NA controls-positive | ||
| Scotland/QEUH-38CEA2D/2022 2022-03-02 Scotland XP Europe OW156660.1 NA controls-positive | ||
| USA/OH-CDC-MMB14658183/2022 2022-03-07 USA XS North America OM981060.1 NA controls-positive | ||
| USA/CO-CDC-FG-248528/2022 2022-01-19 USA XS North America OM477123.1 NA controls-positive | ||
| England/MILK-38AA91B/2022 2022-02-28 England XQ Europe OW192527.1 NA controls-positive | ||
| England/LSPA-3943EF6/2022 2022-03-05 England XQ Europe OW142543.1 NA controls-positive |