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base fork: kyungbae/hw-dicom-register
base: 336161dfaf
...
head fork: kyungbae/hw-dicom-register
compare: 205ec31749
  • 19 commits
  • 84 files changed
  • 0 commit comments
  • 2 contributors
Showing with 1,554 additions and 0 deletions.
  1. +15 −0 .gitignore
  2. +42 −0 Gemfile
  3. +136 −0 Gemfile.lock
  4. +261 −0 README
  5. +7 −0 Rakefile
  6. BIN  app/assets/images/rails.png
  7. +9 −0 app/assets/javascripts/application.js
  8. +82 −0 app/assets/stylesheets/application.css
  9. +3 −0  app/controllers/application_controller.rb
  10. +43 −0 app/controllers/studies_controller.rb
  11. +2 −0  app/helpers/application_helper.rb
  12. +23 −0 app/helpers/error_messages_helper.rb
  13. +22 −0 app/helpers/layout_helper.rb
  14. +2 −0  app/helpers/studies_helper.rb
  15. 0  app/mailers/.gitkeep
  16. +12 −0 app/mailers/notice_mailer.rb
  17. 0  app/models/.gitkeep
  18. +29 −0 app/models/study.rb
  19. +48 −0 app/uploaders/dimcom_file_uploader.rb
  20. +19 −0 app/views/layouts/application.html.erb
  21. +19 −0 app/views/notice_mailer/confirmation_to_sender.html.erb
  22. +18 −0 app/views/notice_mailer/notice_to_doc.html.erb
  23. +11 −0 app/views/studies/_form.html.erb
  24. +8 −0 app/views/studies/edit.html.erb
  25. +23 −0 app/views/studies/index.html.erb
  26. +5 −0 app/views/studies/new.html.erb
  27. +27 −0 app/views/studies/show.html.erb
  28. +4 −0 config.ru
  29. +48 −0 config/application.rb
  30. +6 −0 config/boot.rb
  31. +29 −0 config/database.yml
  32. +5 −0 config/environment.rb
  33. +30 −0 config/environments/development.rb
  34. +60 −0 config/environments/production.rb
  35. +39 −0 config/environments/test.rb
  36. +7 −0 config/initializers/backtrace_silencers.rb
  37. +10 −0 config/initializers/inflections.rb
  38. +5 −0 config/initializers/mime_types.rb
  39. +7 −0 config/initializers/secret_token.rb
  40. +8 −0 config/initializers/session_store.rb
  41. +9 −0 config/initializers/setup_mail.rb
  42. +14 −0 config/initializers/wrap_parameters.rb
  43. +5 −0 config/locales/en.yml
  44. +60 −0 config/routes.rb
  45. +12 −0 db/migrate/20120414204639_create_studies.rb
  46. +5 −0 db/migrate/20120414204818_add_dicom_file_to_studies.rb
  47. +6 −0 db/migrate/20120415182205_add_items_to_studies.rb
  48. +5 −0 db/migrate/20120415193054_add_email_to_studies.rb
  49. +43 −0 db/schema.rb
  50. +7 −0 db/seeds.rb
  51. +2 −0  doc/README_FOR_APP
  52. 0  lib/assets/.gitkeep
  53. 0  lib/tasks/.gitkeep
  54. 0  log/.gitkeep
  55. +26 −0 public/404.html
  56. +26 −0 public/422.html
  57. +26 −0 public/500.html
  58. 0  public/favicon.ico
  59. +5 −0 public/robots.txt
  60. +75 −0 public/stylesheets/application.css
  61. BIN  public/uploads/.DS_Store
  62. BIN  public/uploads/Liver.dcm
  63. BIN  public/uploads/MyImage.dcm
  64. BIN  public/uploads/tmp/.DS_Store
  65. BIN  public/uploads/tmp/20120414-1746-34131-2082/BrainScan.dcm
  66. BIN  public/uploads/tmp/20120414-1913-34131-2842/MyImage.dcm
  67. BIN  public/uploads/tmp/20120414-1914-34131-8042/MyImage.dcm
  68. BIN  public/uploads/tmp/20120414-1915-34131-6742/MyImage.dcm
  69. BIN  public/uploads/tmp/20120414-1916-34131-9675/MyImage.dcm
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  71. BIN  public/uploads/tmp/20120414-2051-35115-7223/MyImage.dcm
  72. +6 −0 script/rails
  73. 0  test/fixtures/.gitkeep
  74. +5 −0 test/fixtures/studies.yml
  75. 0  test/functional/.gitkeep
  76. +7 −0 test/functional/notice_mailer_test.rb
  77. +54 −0 test/functional/studies_controller_test.rb
  78. 0  test/integration/.gitkeep
  79. +12 −0 test/performance/browsing_test.rb
  80. +13 −0 test/test_helper.rb
  81. 0  test/unit/.gitkeep
  82. +7 −0 test/unit/study_test.rb
  83. 0  vendor/assets/stylesheets/.gitkeep
  84. 0  vendor/plugins/.gitkeep
View
15 .gitignore
@@ -0,0 +1,15 @@
+# See http://help.github.com/ignore-files/ for more about ignoring files.
+#
+# If you find yourself ignoring temporary files generated by your text editor
+# or operating system, you probably want to add a global ignore instead:
+# git config --global core.excludesfile ~/.gitignore_global
+
+# Ignore bundler config
+/.bundle
+
+# Ignore the default SQLite database.
+/db/*.sqlite3
+
+# Ignore all logfiles and tempfiles.
+/log/*.log
+/tmp
View
42 Gemfile
@@ -0,0 +1,42 @@
+source 'http://rubygems.org'
+
+gem 'rails', '3.1.3'
+
+# Bundle edge Rails instead:
+# gem 'rails', :git => 'git://github.com/rails/rails.git'
+
+gem 'pg'
+gem 'carrierwave'
+gem 'dicom'
+gem 'nifty-generators', :group => :development
+gem 'thin'
+
+
+
+# Gems used only for assets and not required
+# in production environments by default.
+group :assets do
+ gem 'sass-rails', '~> 3.1.5'
+ gem 'coffee-rails', '~> 3.1.1'
+ gem 'uglifier', '>= 1.0.3'
+end
+
+gem 'jquery-rails'
+
+# To use ActiveModel has_secure_password
+# gem 'bcrypt-ruby', '~> 3.0.0'
+
+# Use unicorn as the web server
+# gem 'unicorn'
+
+# Deploy with Capistrano
+# gem 'capistrano'
+
+# To use debugger
+# gem 'ruby-debug19', :require => 'ruby-debug'
+
+group :test do
+ # Pretty printed test output
+ gem 'turn', '~> 0.8.3', :require => false
+end
+gem "mocha", :group => :test
View
136 Gemfile.lock
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+GEM
+ remote: http://rubygems.org/
+ specs:
+ actionmailer (3.1.3)
+ actionpack (= 3.1.3)
+ mail (~> 2.3.0)
+ actionpack (3.1.3)
+ activemodel (= 3.1.3)
+ activesupport (= 3.1.3)
+ builder (~> 3.0.0)
+ erubis (~> 2.7.0)
+ i18n (~> 0.6)
+ rack (~> 1.3.5)
+ rack-cache (~> 1.1)
+ rack-mount (~> 0.8.2)
+ rack-test (~> 0.6.1)
+ sprockets (~> 2.0.3)
+ activemodel (3.1.3)
+ activesupport (= 3.1.3)
+ builder (~> 3.0.0)
+ i18n (~> 0.6)
+ activerecord (3.1.3)
+ activemodel (= 3.1.3)
+ activesupport (= 3.1.3)
+ arel (~> 2.2.1)
+ tzinfo (~> 0.3.29)
+ activeresource (3.1.3)
+ activemodel (= 3.1.3)
+ activesupport (= 3.1.3)
+ activesupport (3.1.3)
+ multi_json (~> 1.0)
+ ansi (1.4.2)
+ arel (2.2.3)
+ builder (3.0.0)
+ carrierwave (0.5.8)
+ activesupport (~> 3.0)
+ coffee-rails (3.1.1)
+ coffee-script (>= 2.2.0)
+ railties (~> 3.1.0)
+ coffee-script (2.2.0)
+ coffee-script-source
+ execjs
+ coffee-script-source (1.3.1)
+ daemons (1.1.8)
+ dicom (0.9.2)
+ erubis (2.7.0)
+ eventmachine (0.12.10)
+ execjs (1.3.0)
+ multi_json (~> 1.0)
+ hike (1.2.1)
+ i18n (0.6.0)
+ jquery-rails (1.0.19)
+ railties (~> 3.0)
+ thor (~> 0.14)
+ json (1.6.6)
+ mail (2.3.3)
+ i18n (>= 0.4.0)
+ mime-types (~> 1.16)
+ treetop (~> 1.4.8)
+ metaclass (0.0.1)
+ mime-types (1.18)
+ mocha (0.10.5)
+ metaclass (~> 0.0.1)
+ multi_json (1.2.0)
+ nifty-generators (0.4.6)
+ pg (0.13.2)
+ polyglot (0.3.3)
+ rack (1.3.6)
+ rack-cache (1.2)
+ rack (>= 0.4)
+ rack-mount (0.8.3)
+ rack (>= 1.0.0)
+ rack-ssl (1.3.2)
+ rack
+ rack-test (0.6.1)
+ rack (>= 1.0)
+ rails (3.1.3)
+ actionmailer (= 3.1.3)
+ actionpack (= 3.1.3)
+ activerecord (= 3.1.3)
+ activeresource (= 3.1.3)
+ activesupport (= 3.1.3)
+ bundler (~> 1.0)
+ railties (= 3.1.3)
+ railties (3.1.3)
+ actionpack (= 3.1.3)
+ activesupport (= 3.1.3)
+ rack-ssl (~> 1.3.2)
+ rake (>= 0.8.7)
+ rdoc (~> 3.4)
+ thor (~> 0.14.6)
+ rake (0.9.2.2)
+ rdoc (3.12)
+ json (~> 1.4)
+ sass (3.1.15)
+ sass-rails (3.1.6)
+ actionpack (~> 3.1.0)
+ railties (~> 3.1.0)
+ sass (>= 3.1.10)
+ tilt (~> 1.3.2)
+ sprockets (2.0.3)
+ hike (~> 1.2)
+ rack (~> 1.0)
+ tilt (~> 1.1, != 1.3.0)
+ thin (1.3.1)
+ daemons (>= 1.0.9)
+ eventmachine (>= 0.12.6)
+ rack (>= 1.0.0)
+ thor (0.14.6)
+ tilt (1.3.3)
+ treetop (1.4.10)
+ polyglot
+ polyglot (>= 0.3.1)
+ turn (0.8.3)
+ ansi
+ tzinfo (0.3.33)
+ uglifier (1.2.4)
+ execjs (>= 0.3.0)
+ multi_json (>= 1.0.2)
+
+PLATFORMS
+ ruby
+
+DEPENDENCIES
+ carrierwave
+ coffee-rails (~> 3.1.1)
+ dicom
+ jquery-rails
+ mocha
+ nifty-generators
+ pg
+ rails (= 3.1.3)
+ sass-rails (~> 3.1.5)
+ thin
+ turn (~> 0.8.3)
+ uglifier (>= 1.0.3)
View
261 README
@@ -0,0 +1,261 @@
+== Welcome to Rails
+
+Rails is a web-application framework that includes everything needed to create
+database-backed web applications according to the Model-View-Control pattern.
+
+This pattern splits the view (also called the presentation) into "dumb"
+templates that are primarily responsible for inserting pre-built data in between
+HTML tags. The model contains the "smart" domain objects (such as Account,
+Product, Person, Post) that holds all the business logic and knows how to
+persist themselves to a database. The controller handles the incoming requests
+(such as Save New Account, Update Product, Show Post) by manipulating the model
+and directing data to the view.
+
+In Rails, the model is handled by what's called an object-relational mapping
+layer entitled Active Record. This layer allows you to present the data from
+database rows as objects and embellish these data objects with business logic
+methods. You can read more about Active Record in
+link:files/vendor/rails/activerecord/README.html.
+
+The controller and view are handled by the Action Pack, which handles both
+layers by its two parts: Action View and Action Controller. These two layers
+are bundled in a single package due to their heavy interdependence. This is
+unlike the relationship between the Active Record and Action Pack that is much
+more separate. Each of these packages can be used independently outside of
+Rails. You can read more about Action Pack in
+link:files/vendor/rails/actionpack/README.html.
+
+
+== Getting Started
+
+1. At the command prompt, create a new Rails application:
+ <tt>rails new myapp</tt> (where <tt>myapp</tt> is the application name)
+
+2. Change directory to <tt>myapp</tt> and start the web server:
+ <tt>cd myapp; rails server</tt> (run with --help for options)
+
+3. Go to http://localhost:3000/ and you'll see:
+ "Welcome aboard: You're riding Ruby on Rails!"
+
+4. Follow the guidelines to start developing your application. You can find
+the following resources handy:
+
+* The Getting Started Guide: http://guides.rubyonrails.org/getting_started.html
+* Ruby on Rails Tutorial Book: http://www.railstutorial.org/
+
+
+== Debugging Rails
+
+Sometimes your application goes wrong. Fortunately there are a lot of tools that
+will help you debug it and get it back on the rails.
+
+First area to check is the application log files. Have "tail -f" commands
+running on the server.log and development.log. Rails will automatically display
+debugging and runtime information to these files. Debugging info will also be
+shown in the browser on requests from 127.0.0.1.
+
+You can also log your own messages directly into the log file from your code
+using the Ruby logger class from inside your controllers. Example:
+
+ class WeblogController < ActionController::Base
+ def destroy
+ @weblog = Weblog.find(params[:id])
+ @weblog.destroy
+ logger.info("#{Time.now} Destroyed Weblog ID ##{@weblog.id}!")
+ end
+ end
+
+The result will be a message in your log file along the lines of:
+
+ Mon Oct 08 14:22:29 +1000 2007 Destroyed Weblog ID #1!
+
+More information on how to use the logger is at http://www.ruby-doc.org/core/
+
+Also, Ruby documentation can be found at http://www.ruby-lang.org/. There are
+several books available online as well:
+
+* Programming Ruby: http://www.ruby-doc.org/docs/ProgrammingRuby/ (Pickaxe)
+* Learn to Program: http://pine.fm/LearnToProgram/ (a beginners guide)
+
+These two books will bring you up to speed on the Ruby language and also on
+programming in general.
+
+
+== Debugger
+
+Debugger support is available through the debugger command when you start your
+Mongrel or WEBrick server with --debugger. This means that you can break out of
+execution at any point in the code, investigate and change the model, and then,
+resume execution! You need to install ruby-debug to run the server in debugging
+mode. With gems, use <tt>sudo gem install ruby-debug</tt>. Example:
+
+ class WeblogController < ActionController::Base
+ def index
+ @posts = Post.all
+ debugger
+ end
+ end
+
+So the controller will accept the action, run the first line, then present you
+with a IRB prompt in the server window. Here you can do things like:
+
+ >> @posts.inspect
+ => "[#<Post:0x14a6be8
+ @attributes={"title"=>nil, "body"=>nil, "id"=>"1"}>,
+ #<Post:0x14a6620
+ @attributes={"title"=>"Rails", "body"=>"Only ten..", "id"=>"2"}>]"
+ >> @posts.first.title = "hello from a debugger"
+ => "hello from a debugger"
+
+...and even better, you can examine how your runtime objects actually work:
+
+ >> f = @posts.first
+ => #<Post:0x13630c4 @attributes={"title"=>nil, "body"=>nil, "id"=>"1"}>
+ >> f.
+ Display all 152 possibilities? (y or n)
+
+Finally, when you're ready to resume execution, you can enter "cont".
+
+
+== Console
+
+The console is a Ruby shell, which allows you to interact with your
+application's domain model. Here you'll have all parts of the application
+configured, just like it is when the application is running. You can inspect
+domain models, change values, and save to the database. Starting the script
+without arguments will launch it in the development environment.
+
+To start the console, run <tt>rails console</tt> from the application
+directory.
+
+Options:
+
+* Passing the <tt>-s, --sandbox</tt> argument will rollback any modifications
+ made to the database.
+* Passing an environment name as an argument will load the corresponding
+ environment. Example: <tt>rails console production</tt>.
+
+To reload your controllers and models after launching the console run
+<tt>reload!</tt>
+
+More information about irb can be found at:
+link:http://www.rubycentral.org/pickaxe/irb.html
+
+
+== dbconsole
+
+You can go to the command line of your database directly through <tt>rails
+dbconsole</tt>. You would be connected to the database with the credentials
+defined in database.yml. Starting the script without arguments will connect you
+to the development database. Passing an argument will connect you to a different
+database, like <tt>rails dbconsole production</tt>. Currently works for MySQL,
+PostgreSQL and SQLite 3.
+
+== Description of Contents
+
+The default directory structure of a generated Ruby on Rails application:
+
+ |-- app
+ | |-- assets
+ | |-- images
+ | |-- javascripts
+ | `-- stylesheets
+ | |-- controllers
+ | |-- helpers
+ | |-- mailers
+ | |-- models
+ | `-- views
+ | `-- layouts
+ |-- config
+ | |-- environments
+ | |-- initializers
+ | `-- locales
+ |-- db
+ |-- doc
+ |-- lib
+ | `-- tasks
+ |-- log
+ |-- public
+ |-- script
+ |-- test
+ | |-- fixtures
+ | |-- functional
+ | |-- integration
+ | |-- performance
+ | `-- unit
+ |-- tmp
+ | |-- cache
+ | |-- pids
+ | |-- sessions
+ | `-- sockets
+ `-- vendor
+ |-- assets
+ `-- stylesheets
+ `-- plugins
+
+app
+ Holds all the code that's specific to this particular application.
+
+app/assets
+ Contains subdirectories for images, stylesheets, and JavaScript files.
+
+app/controllers
+ Holds controllers that should be named like weblogs_controller.rb for
+ automated URL mapping. All controllers should descend from
+ ApplicationController which itself descends from ActionController::Base.
+
+app/models
+ Holds models that should be named like post.rb. Models descend from
+ ActiveRecord::Base by default.
+
+app/views
+ Holds the template files for the view that should be named like
+ weblogs/index.html.erb for the WeblogsController#index action. All views use
+ eRuby syntax by default.
+
+app/views/layouts
+ Holds the template files for layouts to be used with views. This models the
+ common header/footer method of wrapping views. In your views, define a layout
+ using the <tt>layout :default</tt> and create a file named default.html.erb.
+ Inside default.html.erb, call <% yield %> to render the view using this
+ layout.
+
+app/helpers
+ Holds view helpers that should be named like weblogs_helper.rb. These are
+ generated for you automatically when using generators for controllers.
+ Helpers can be used to wrap functionality for your views into methods.
+
+config
+ Configuration files for the Rails environment, the routing map, the database,
+ and other dependencies.
+
+db
+ Contains the database schema in schema.rb. db/migrate contains all the
+ sequence of Migrations for your schema.
+
+doc
+ This directory is where your application documentation will be stored when
+ generated using <tt>rake doc:app</tt>
+
+lib
+ Application specific libraries. Basically, any kind of custom code that
+ doesn't belong under controllers, models, or helpers. This directory is in
+ the load path.
+
+public
+ The directory available for the web server. Also contains the dispatchers and the
+ default HTML files. This should be set as the DOCUMENT_ROOT of your web
+ server.
+
+script
+ Helper scripts for automation and generation.
+
+test
+ Unit and functional tests along with fixtures. When using the rails generate
+ command, template test files will be generated for you and placed in this
+ directory.
+
+vendor
+ External libraries that the application depends on. Also includes the plugins
+ subdirectory. If the app has frozen rails, those gems also go here, under
+ vendor/rails/. This directory is in the load path.
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7 Rakefile
@@ -0,0 +1,7 @@
+#!/usr/bin/env rake
+# Add your own tasks in files placed in lib/tasks ending in .rake,
+# for example lib/tasks/capistrano.rake, and they will automatically be available to Rake.
+
+require File.expand_path('../config/application', __FILE__)
+
+Upacs::Application.load_tasks
View
BIN  app/assets/images/rails.png
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9 app/assets/javascripts/application.js
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+// This is a manifest file that'll be compiled into including all the files listed below.
+// Add new JavaScript/Coffee code in separate files in this directory and they'll automatically
+// be included in the compiled file accessible from http://example.com/assets/application.js
+// It's not advisable to add code directly here, but if you do, it'll appear at the bottom of the
+// the compiled file.
+//
+//= require jquery
+//= require jquery_ujs
+//= require_tree .
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82 app/assets/stylesheets/application.css
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+/*
+ * This is a manifest file that'll automatically include all the stylesheets available in this directory
+ * and any sub-directories. You're free to add application-wide styles to this file and they'll appear at
+ * the top of the compiled file, but it's generally better to create a new file per style scope.
+ *= require_self
+ *= require_tree .
+*/
+body {
+ background-color: #4B7399;
+ font-family: Verdana, Helvetica, Arial;
+ font-size: 14px;
+}
+
+a img {
+ border: none;
+}
+
+a {
+ color: #0000FF;
+}
+
+.clear {
+ clear: both;
+ height: 0;
+ overflow: hidden;
+}
+
+#container {
+ width: 75%;
+ margin: 0 auto;
+ background-color: #FFF;
+ padding: 20px 40px;
+ border: solid 1px black;
+ margin-top: 20px;
+}
+
+#flash_notice, #flash_error, #flash_alert {
+ padding: 5px 8px;
+ margin: 10px 0;
+}
+
+#flash_notice {
+ background-color: #CFC;
+ border: solid 1px #6C6;
+}
+
+#flash_error, #flash_alert {
+ background-color: #FCC;
+ border: solid 1px #C66;
+}
+
+.fieldWithErrors {
+ display: inline;
+}
+
+.error_messages {
+ width: 400px;
+ border: 2px solid #CF0000;
+ padding: 0px;
+ padding-bottom: 12px;
+ margin-bottom: 20px;
+ background-color: #f0f0f0;
+ font-size: 12px;
+}
+
+.error_messages h2 {
+ text-align: left;
+ font-weight: bold;
+ padding: 5px 10px;
+ font-size: 12px;
+ margin: 0;
+ background-color: #c00;
+ color: #fff;
+}
+
+.error_messages p {
+ margin: 8px 10px;
+}
+
+.error_messages ul {
+ margin: 0;
+}
View
3  app/controllers/application_controller.rb
@@ -0,0 +1,3 @@
+class ApplicationController < ActionController::Base
+ protect_from_forgery
+end
View
43 app/controllers/studies_controller.rb
@@ -0,0 +1,43 @@
+class StudiesController < ApplicationController
+ def index
+ @studies = Study.all
+ end
+
+ def show
+ @study = Study.find(params[:id])
+ end
+
+ def new
+ @study = Study.new
+ end
+
+ def create
+ @study = Study.new(params[:study])
+ if @study.save
+ NoticeMailer.notice_to_doc(@study).deliver
+ NoticeMailer.confirmation_to_sender(@study).deliver
+ redirect_to @study, :notice => "Successfully created study."
+ else
+ render :action => 'new'
+ end
+ end
+
+ def edit
+ @study = Study.find(params[:id])
+ end
+
+ def update
+ @study = Study.find(params[:id])
+ if @study.update_attributes(params[:study])
+ redirect_to @study, :notice => "Successfully updated study."
+ else
+ render :action => 'edit'
+ end
+ end
+
+ def destroy
+ @study = Study.find(params[:id])
+ @study.destroy
+ redirect_to studies_url, :notice => "Successfully destroyed study."
+ end
+end
View
2  app/helpers/application_helper.rb
@@ -0,0 +1,2 @@
+module ApplicationHelper
+end
View
23 app/helpers/error_messages_helper.rb
@@ -0,0 +1,23 @@
+module ErrorMessagesHelper
+ # Render error messages for the given objects. The :message and :header_message options are allowed.
+ def error_messages_for(*objects)
+ options = objects.extract_options!
+ options[:header_message] ||= I18n.t(:"activerecord.errors.header", :default => "Invalid Fields")
+ options[:message] ||= I18n.t(:"activerecord.errors.message", :default => "Correct the following errors and try again.")
+ messages = objects.compact.map { |o| o.errors.full_messages }.flatten
+ unless messages.empty?
+ content_tag(:div, :class => "error_messages") do
+ list_items = messages.map { |msg| content_tag(:li, msg) }
+ content_tag(:h2, options[:header_message]) + content_tag(:p, options[:message]) + content_tag(:ul, list_items.join.html_safe)
+ end
+ end
+ end
+
+ module FormBuilderAdditions
+ def error_messages(options = {})
+ @template.error_messages_for(@object, options)
+ end
+ end
+end
+
+ActionView::Helpers::FormBuilder.send(:include, ErrorMessagesHelper::FormBuilderAdditions)
View
22 app/helpers/layout_helper.rb
@@ -0,0 +1,22 @@
+# These helper methods can be called in your template to set variables to be used in the layout
+# This module should be included in all views globally,
+# to do so you may need to add this line to your ApplicationController
+# helper :layout
+module LayoutHelper
+ def title(page_title, show_title = true)
+ content_for(:title) { h(page_title.to_s) }
+ @show_title = show_title
+ end
+
+ def show_title?
+ @show_title
+ end
+
+ def stylesheet(*args)
+ content_for(:head) { stylesheet_link_tag(*args) }
+ end
+
+ def javascript(*args)
+ content_for(:head) { javascript_include_tag(*args) }
+ end
+end
View
2  app/helpers/studies_helper.rb
@@ -0,0 +1,2 @@
+module StudiesHelper
+end
View
0  app/mailers/.gitkeep
No changes.
View
12 app/mailers/notice_mailer.rb
@@ -0,0 +1,12 @@
+class NoticeMailer < ActionMailer::Base
+
+ def notice_to_doc(study)
+ @study = study
+ mail(:to => 'kyungbae@gmail.com', :subject => "You got a new DICOM file", :from => 'kyungbae@seededu.com')
+ end
+
+ def confirmation_to_sender(study)
+ @study = study
+ mail(:to => @study.email, :subject => "Confirmation of Your Upload", :from => 'info@nohope.com')
+ end
+end
View
0  app/models/.gitkeep
No changes.
View
29 app/models/study.rb
@@ -0,0 +1,29 @@
+class Study < ActiveRecord::Base
+ attr_accessible :name, :dicom_file, :status, :study_date, :email
+ mount_uploader :dicom_file
+
+ validates :dicom_file, :presence => true
+ validates :email, :presence => true,
+ :format => { :with => /^([^@\s]+)@((?:[-a-z0-9]+\.)+[a-z]{2,})$/i }
+
+
+ before_save :extract_data_from_dicom
+
+ require 'dicom'
+
+ def extract_data_from_dicom
+ obj = DICOM::DObject.read('public' + dicom_file.to_s)
+ if obj.read?
+
+ self.name = obj.value("0010,0010")
+ self.study_date = obj.value("0008,0020").to_s
+ self.status = 'DICOM File'
+ else
+ self.name = 'N/A'
+ self.status = 'Non-DICOM File'
+ self.study_date = 'N/A'
+
+ end
+ end
+
+end
View
48 app/uploaders/dimcom_file_uploader.rb
@@ -0,0 +1,48 @@
+# encoding: utf-8
+
+class DimcomFileUploader < CarrierWave::Uploader::Base
+
+ # Include RMagick or MiniMagick support:
+ # include CarrierWave::RMagick
+ # include CarrierWave::MiniMagick
+
+ # Choose what kind of storage to use for this uploader:
+ storage :file
+ # storage :fog
+
+ # Override the directory where uploaded files will be stored.
+ # This is a sensible default for uploaders that are meant to be mounted:
+ def store_dir
+ "uploads/#{model.class.to_s.underscore}/#{mounted_as}/#{model.id}"
+ end
+
+ # Provide a default URL as a default if there hasn't been a file uploaded:
+ # def default_url
+ # "/images/fallback/" + [version_name, "default.png"].compact.join('_')
+ # end
+
+ # Process files as they are uploaded:
+ # process :scale => [200, 300]
+ #
+ # def scale(width, height)
+ # # do something
+ # end
+
+ # Create different versions of your uploaded files:
+ # version :thumb do
+ # process :scale => [50, 50]
+ # end
+
+ # Add a white list of extensions which are allowed to be uploaded.
+ # For images you might use something like this:
+ # def extension_white_list
+ # %w(jpg jpeg gif png)
+ # end
+
+ # Override the filename of the uploaded files:
+ # Avoid using model.id or version_name here, see uploader/store.rb for details.
+ # def filename
+ # "something.jpg" if original_filename
+ # end
+
+end
View
19 app/views/layouts/application.html.erb
@@ -0,0 +1,19 @@
+<!DOCTYPE html>
+<html>
+ <head>
+ <title><%= content_for?(:title) ? yield(:title) : "Untitled" %></title>
+ <%= stylesheet_link_tag "application" %>
+ <%= javascript_include_tag "application" %>
+ <%= csrf_meta_tag %>
+ <%= yield(:head) %>
+ </head>
+ <body>
+ <div id="container">
+ <% flash.each do |name, msg| %>
+ <%= content_tag :div, msg, :id => "flash_#{name}" %>
+ <% end %>
+ <%= content_tag :h1, yield(:title) if show_title? %>
+ <%= yield %>
+ </div>
+ </body>
+</html>
View
19 app/views/notice_mailer/confirmation_to_sender.html.erb
@@ -0,0 +1,19 @@
+<!DOCTYPE html>
+<html>
+ <head>
+ <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+ </head>
+ <body>
+ <h1>Hello,</h1>
+ <p>
+
+ <% if @study.status === 'DICOM File'%>
+ We got a DICOM file of <%= @study.name %>.<br/>
+ <% else %>
+ We got your file, however it was not a DICOM file. Can you check and upload it again?
+ <% end %>
+
+ Thank you.
+ </p>
+ </body>
+</html>
View
18 app/views/notice_mailer/notice_to_doc.html.erb
@@ -0,0 +1,18 @@
+<!DOCTYPE html>
+<html>
+ <head>
+ <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+ </head>
+ <body>
+ <h1>Hello Dr. Evil,</h1>
+ <p>
+ <% if @study.status === 'DICOM File' %>
+ A new DICOM file of <%= @study.name %> has been uploaded. <br/>
+ You can check the file at <a href="http://blazing-dawn-4586.herokuapp.com/studies">the site</a>
+ <% else %>
+ A new file has been uploaded, but it is not a DICOM file. We sent email to the sender to upload a correct DICOM file.
+ <% end %>
+ Thank you.
+ </p>
+ </body>
+</html>
View
11 app/views/studies/_form.html.erb
@@ -0,0 +1,11 @@
+<%= form_for @study, :html => {:multipart => true} do |f| %>
+ <%= f.error_messages %>
+ <p>
+ <%= f.file_field :dicom_file %>
+ </p>
+ <p>
+ <strong>Sender Email:</strong>
+ <%= f.text_field :email %>
+ </p>
+ <p><%= f.submit %></p>
+<% end %>
View
8 app/views/studies/edit.html.erb
@@ -0,0 +1,8 @@
+<% title "Edit Study" %>
+
+<%= render 'form' %>
+
+<p>
+ <%= link_to "Show", @study %> |
+ <%= link_to "View All", studies_path %>
+</p>
View
23 app/views/studies/index.html.erb
@@ -0,0 +1,23 @@
+<% title "Studies" %>
+
+<table>
+ <tr>
+ <th>Name</th>
+ <th>Sender Email</th>
+ <th>Study Date</th>
+ <th>Status</th>
+ </tr>
+ <% for study in @studies %>
+ <tr>
+ <td><%= study.name %></td>
+ <td><%= study.email %></td>
+ <td><%= study.study_date %></td>
+ <td><%= study.status %></td>
+ <td><%= link_to "Show", study %></td>
+ <td><%= link_to "Edit", edit_study_path(study) %></td>
+ <td><%= link_to "Destroy", study, :confirm => 'Are you sure?', :method => :delete %></td>
+ </tr>
+ <% end %>
+</table>
+
+<p><%= link_to "New Study", new_study_path %></p>
View
5 app/views/studies/new.html.erb
@@ -0,0 +1,5 @@
+<% title "New Study" %>
+
+<%= render 'form' %>
+
+<p><%= link_to "Back to List", studies_path %></p>
View
27 app/views/studies/show.html.erb
@@ -0,0 +1,27 @@
+<% title "Study" %>
+
+<p>
+ <strong>Name:</strong>
+ <%= @study.name %>
+</p>
+<p>
+ <strong>Sender Email:</strong>
+ <%= @study.email %>
+</p>
+<p>
+ <strong>
+ Status:
+ </strong>
+ <%= @study.status %>
+</p>
+<p>
+ <strong>
+ Study Date:
+ </strong>
+ <%= @study.study_date %>
+</p>
+<p>
+ <%= link_to "Edit", edit_study_path(@study) %> |
+ <%= link_to "Destroy", @study, :confirm => 'Are you sure?', :method => :delete %> |
+ <%= link_to "View All", studies_path %>
+</p>
View
4 config.ru
@@ -0,0 +1,4 @@
+# This file is used by Rack-based servers to start the application.
+
+require ::File.expand_path('../config/environment', __FILE__)
+run Upacs::Application
View
48 config/application.rb
@@ -0,0 +1,48 @@
+require File.expand_path('../boot', __FILE__)
+
+require 'rails/all'
+
+if defined?(Bundler)
+ # If you precompile assets before deploying to production, use this line
+ Bundler.require(*Rails.groups(:assets => %w(development test)))
+ # If you want your assets lazily compiled in production, use this line
+ # Bundler.require(:default, :assets, Rails.env)
+end
+
+module Upacs
+ class Application < Rails::Application
+ # Settings in config/environments/* take precedence over those specified here.
+ # Application configuration should go into files in config/initializers
+ # -- all .rb files in that directory are automatically loaded.
+
+ # Custom directories with classes and modules you want to be autoloadable.
+ # config.autoload_paths += %W(#{config.root}/extras)
+
+ # Only load the plugins named here, in the order given (default is alphabetical).
+ # :all can be used as a placeholder for all plugins not explicitly named.
+ # config.plugins = [ :exception_notification, :ssl_requirement, :all ]
+
+ # Activate observers that should always be running.
+ # config.active_record.observers = :cacher, :garbage_collector, :forum_observer
+
+ # Set Time.zone default to the specified zone and make Active Record auto-convert to this zone.
+ # Run "rake -D time" for a list of tasks for finding time zone names. Default is UTC.
+ # config.time_zone = 'Central Time (US & Canada)'
+
+ # The default locale is :en and all translations from config/locales/*.rb,yml are auto loaded.
+ # config.i18n.load_path += Dir[Rails.root.join('my', 'locales', '*.{rb,yml}').to_s]
+ # config.i18n.default_locale = :de
+
+ # Configure the default encoding used in templates for Ruby 1.9.
+ config.encoding = "utf-8"
+
+ # Configure sensitive parameters which will be filtered from the log file.
+ config.filter_parameters += [:password]
+
+ # Enable the asset pipeline
+ config.assets.enabled = true
+
+ # Version of your assets, change this if you want to expire all your assets
+ config.assets.version = '1.0'
+ end
+end
View
6 config/boot.rb
@@ -0,0 +1,6 @@
+require 'rubygems'
+
+# Set up gems listed in the Gemfile.
+ENV['BUNDLE_GEMFILE'] ||= File.expand_path('../../Gemfile', __FILE__)
+
+require 'bundler/setup' if File.exists?(ENV['BUNDLE_GEMFILE'])
View
29 config/database.yml
@@ -0,0 +1,29 @@
+# SQLite version 3.x
+# gem install sqlite3
+#
+# Ensure the SQLite 3 gem is defined in your Gemfile
+# gem 'sqlite3'
+development:
+ adapter: postgresql
+ database: dicom_dev
+ pool: 5
+ timeout: 5000
+ username: _postgres
+ password: dicom
+
+# Warning: The database defined as "test" will be erased and
+# re-generated from your development database when you run "rake".
+# Do not set this db to the same as development or production.
+test:
+ adapter: sqlite3
+ database: db/test.sqlite3
+ pool: 5
+ timeout: 5000
+
+production:
+ adapter: postgresql
+ database: dicom_dev
+ pool: 5
+ timeout: 5000
+ username: _postgres
+ password: dicom
View
5 config/environment.rb
@@ -0,0 +1,5 @@
+# Load the rails application
+require File.expand_path('../application', __FILE__)
+
+# Initialize the rails application
+Upacs::Application.initialize!
View
30 config/environments/development.rb
@@ -0,0 +1,30 @@
+Upacs::Application.configure do
+ # Settings specified here will take precedence over those in config/application.rb
+
+ # In the development environment your application's code is reloaded on
+ # every request. This slows down response time but is perfect for development
+ # since you don't have to restart the web server when you make code changes.
+ config.cache_classes = false
+
+ # Log error messages when you accidentally call methods on nil.
+ config.whiny_nils = true
+
+ # Show full error reports and disable caching
+ config.consider_all_requests_local = true
+ config.action_controller.perform_caching = false
+
+ # Don't care if the mailer can't send
+ config.action_mailer.raise_delivery_errors = true
+
+ # Print deprecation notices to the Rails logger
+ config.active_support.deprecation = :log
+
+ # Only use best-standards-support built into browsers
+ config.action_dispatch.best_standards_support = :builtin
+
+ # Do not compress assets
+ config.assets.compress = false
+
+ # Expands the lines which load the assets
+ config.assets.debug = true
+end
View
60 config/environments/production.rb
@@ -0,0 +1,60 @@
+Upacs::Application.configure do
+ # Settings specified here will take precedence over those in config/application.rb
+
+ # Code is not reloaded between requests
+ config.cache_classes = true
+
+ # Full error reports are disabled and caching is turned on
+ config.consider_all_requests_local = false
+ config.action_controller.perform_caching = true
+
+ # Disable Rails's static asset server (Apache or nginx will already do this)
+ config.serve_static_assets = false
+
+ # Compress JavaScripts and CSS
+ config.assets.compress = true
+
+ # Don't fallback to assets pipeline if a precompiled asset is missed
+ config.assets.compile = false
+
+ # Generate digests for assets URLs
+ config.assets.digest = true
+
+ # Defaults to Rails.root.join("public/assets")
+ # config.assets.manifest = YOUR_PATH
+
+ # Specifies the header that your server uses for sending files
+ # config.action_dispatch.x_sendfile_header = "X-Sendfile" # for apache
+ # config.action_dispatch.x_sendfile_header = 'X-Accel-Redirect' # for nginx
+
+ # Force all access to the app over SSL, use Strict-Transport-Security, and use secure cookies.
+ # config.force_ssl = true
+
+ # See everything in the log (default is :info)
+ # config.log_level = :debug
+
+ # Use a different logger for distributed setups
+ # config.logger = SyslogLogger.new
+
+ # Use a different cache store in production
+ # config.cache_store = :mem_cache_store
+
+ # Enable serving of images, stylesheets, and JavaScripts from an asset server
+ # config.action_controller.asset_host = "http://assets.example.com"
+
+ # Precompile additional assets (application.js, application.css, and all non-JS/CSS are already added)
+ # config.assets.precompile += %w( search.js )
+
+ # Disable delivery errors, bad email addresses will be ignored
+ # config.action_mailer.raise_delivery_errors = false
+
+ # Enable threaded mode
+ # config.threadsafe!
+
+ # Enable locale fallbacks for I18n (makes lookups for any locale fall back to
+ # the I18n.default_locale when a translation can not be found)
+ config.i18n.fallbacks = true
+
+ # Send deprecation notices to registered listeners
+ config.active_support.deprecation = :notify
+end
View
39 config/environments/test.rb
@@ -0,0 +1,39 @@
+Upacs::Application.configure do
+ # Settings specified here will take precedence over those in config/application.rb
+
+ # The test environment is used exclusively to run your application's
+ # test suite. You never need to work with it otherwise. Remember that
+ # your test database is "scratch space" for the test suite and is wiped
+ # and recreated between test runs. Don't rely on the data there!
+ config.cache_classes = true
+
+ # Configure static asset server for tests with Cache-Control for performance
+ config.serve_static_assets = true
+ config.static_cache_control = "public, max-age=3600"
+
+ # Log error messages when you accidentally call methods on nil
+ config.whiny_nils = true
+
+ # Show full error reports and disable caching
+ config.consider_all_requests_local = true
+ config.action_controller.perform_caching = false
+
+ # Raise exceptions instead of rendering exception templates
+ config.action_dispatch.show_exceptions = false
+
+ # Disable request forgery protection in test environment
+ config.action_controller.allow_forgery_protection = false
+
+ # Tell Action Mailer not to deliver emails to the real world.
+ # The :test delivery method accumulates sent emails in the
+ # ActionMailer::Base.deliveries array.
+ config.action_mailer.delivery_method = :test
+
+ # Use SQL instead of Active Record's schema dumper when creating the test database.
+ # This is necessary if your schema can't be completely dumped by the schema dumper,
+ # like if you have constraints or database-specific column types
+ # config.active_record.schema_format = :sql
+
+ # Print deprecation notices to the stderr
+ config.active_support.deprecation = :stderr
+end
View
7 config/initializers/backtrace_silencers.rb
@@ -0,0 +1,7 @@
+# Be sure to restart your server when you modify this file.
+
+# You can add backtrace silencers for libraries that you're using but don't wish to see in your backtraces.
+# Rails.backtrace_cleaner.add_silencer { |line| line =~ /my_noisy_library/ }
+
+# You can also remove all the silencers if you're trying to debug a problem that might stem from framework code.
+# Rails.backtrace_cleaner.remove_silencers!
View
10 config/initializers/inflections.rb
@@ -0,0 +1,10 @@
+# Be sure to restart your server when you modify this file.
+
+# Add new inflection rules using the following format
+# (all these examples are active by default):
+# ActiveSupport::Inflector.inflections do |inflect|
+# inflect.plural /^(ox)$/i, '\1en'
+# inflect.singular /^(ox)en/i, '\1'
+# inflect.irregular 'person', 'people'
+# inflect.uncountable %w( fish sheep )
+# end
View
5 config/initializers/mime_types.rb
@@ -0,0 +1,5 @@
+# Be sure to restart your server when you modify this file.
+
+# Add new mime types for use in respond_to blocks:
+# Mime::Type.register "text/richtext", :rtf
+# Mime::Type.register_alias "text/html", :iphone
View
7 config/initializers/secret_token.rb
@@ -0,0 +1,7 @@
+# Be sure to restart your server when you modify this file.
+
+# Your secret key for verifying the integrity of signed cookies.
+# If you change this key, all old signed cookies will become invalid!
+# Make sure the secret is at least 30 characters and all random,
+# no regular words or you'll be exposed to dictionary attacks.
+Upacs::Application.config.secret_token = '70a82823e359a540dd18d3aea459f4bfeeaf566172a97fe4291227d7df3ce1f6f2c41cda019e25a50ca2980af6b27de44f1168d5ab8c036c05fa90a7b1d9f2b7'
View
8 config/initializers/session_store.rb
@@ -0,0 +1,8 @@
+# Be sure to restart your server when you modify this file.
+
+Upacs::Application.config.session_store :cookie_store, key: '_upacs_session'
+
+# Use the database for sessions instead of the cookie-based default,
+# which shouldn't be used to store highly confidential information
+# (create the session table with "rails generate session_migration")
+# Upacs::Application.config.session_store :active_record_store
View
9 config/initializers/setup_mail.rb
@@ -0,0 +1,9 @@
+ActionMailer::Base.smtp_settings = {
+ :address => "smtp.sendgrid.net",
+ :port => 587,
+ :domain => "heroku.com",
+ :user_name => ENV['SENDGRID_USERNAME'],
+ :password => ENV['SENDGRID_PASSWORD'],
+ :authentication => :plain,
+ :enable_starttls_auto => true
+}
View
14 config/initializers/wrap_parameters.rb
@@ -0,0 +1,14 @@
+# Be sure to restart your server when you modify this file.
+#
+# This file contains settings for ActionController::ParamsWrapper which
+# is enabled by default.
+
+# Enable parameter wrapping for JSON. You can disable this by setting :format to an empty array.
+ActiveSupport.on_load(:action_controller) do
+ wrap_parameters format: [:json]
+end
+
+# Disable root element in JSON by default.
+ActiveSupport.on_load(:active_record) do
+ self.include_root_in_json = false
+end
View
5 config/locales/en.yml
@@ -0,0 +1,5 @@
+# Sample localization file for English. Add more files in this directory for other locales.
+# See https://github.com/svenfuchs/rails-i18n/tree/master/rails%2Flocale for starting points.
+
+en:
+ hello: "Hello world"
View
60 config/routes.rb
@@ -0,0 +1,60 @@
+Upacs::Application.routes.draw do
+ resources :studies
+
+ # The priority is based upon order of creation:
+ # first created -> highest priority.
+
+ # Sample of regular route:
+ # match 'products/:id' => 'catalog#view'
+ # Keep in mind you can assign values other than :controller and :action
+
+ # Sample of named route:
+ # match 'products/:id/purchase' => 'catalog#purchase', :as => :purchase
+ # This route can be invoked with purchase_url(:id => product.id)
+
+ # Sample resource route (maps HTTP verbs to controller actions automatically):
+ # resources :products
+
+ # Sample resource route with options:
+ # resources :products do
+ # member do
+ # get 'short'
+ # post 'toggle'
+ # end
+ #
+ # collection do
+ # get 'sold'
+ # end
+ # end
+
+ # Sample resource route with sub-resources:
+ # resources :products do
+ # resources :comments, :sales
+ # resource :seller
+ # end
+
+ # Sample resource route with more complex sub-resources
+ # resources :products do
+ # resources :comments
+ # resources :sales do
+ # get 'recent', :on => :collection
+ # end
+ # end
+
+ # Sample resource route within a namespace:
+ # namespace :admin do
+ # # Directs /admin/products/* to Admin::ProductsController
+ # # (app/controllers/admin/products_controller.rb)
+ # resources :products
+ # end
+
+ # You can have the root of your site routed with "root"
+ # just remember to delete public/index.html.
+ root :to => 'studies#index'
+
+ # See how all your routes lay out with "rake routes"
+
+ # This is a legacy wild controller route that's not recommended for RESTful applications.
+ # Note: This route will make all actions in every controller accessible via GET requests.
+ # match ':controller(/:action(/:id(.:format)))'
+end
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12 db/migrate/20120414204639_create_studies.rb
@@ -0,0 +1,12 @@
+class CreateStudies < ActiveRecord::Migration
+ def self.up
+ create_table :studies do |t|
+ t.string :name
+ t.timestamps
+ end
+ end
+
+ def self.down
+ drop_table :studies
+ end
+end
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5 db/migrate/20120414204818_add_dicom_file_to_studies.rb
@@ -0,0 +1,5 @@
+class AddDicomFileToStudies < ActiveRecord::Migration
+ def change
+ add_column :studies, :dicom_file, :string
+ end
+end
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6 db/migrate/20120415182205_add_items_to_studies.rb
@@ -0,0 +1,6 @@
+class AddItemsToStudies < ActiveRecord::Migration
+ def change
+ add_column :studies, :status, :string
+ add_column :studies, :study_date, :string
+ end
+end
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5 db/migrate/20120415193054_add_email_to_studies.rb
@@ -0,0 +1,5 @@
+class AddEmailToStudies < ActiveRecord::Migration
+ def change
+ add_column :studies, :email, :string
+ end
+end
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43 db/schema.rb
@@ -0,0 +1,43 @@
+# encoding: UTF-8
+# This file is auto-generated from the current state of the database. Instead
+# of editing this file, please use the migrations feature of Active Record to
+# incrementally modify your database, and then regenerate this schema definition.
+#
+# Note that this schema.rb definition is the authoritative source for your
+# database schema. If you need to create the application database on another
+# system, you should be using db:schema:load, not running all the migrations
+# from scratch. The latter is a flawed and unsustainable approach (the more migrations
+# you'll amass, the slower it'll run and the greater likelihood for issues).
+#
+# It's strongly recommended to check this file into your version control system.
+
+ActiveRecord::Schema.define(:version => 20120415182205) do
+
+ create_table "cases", :force => true do |t|
+ t.string "name"
+ t.datetime "created_at"
+ t.datetime "updated_at"
+ t.string "dicom_file_name"
+ end
+
+ create_table "examinations", :force => true do |t|
+ t.string "study"
+ t.string "name"
+ t.datetime "created_at"
+ t.datetime "updated_at"
+ t.string "dicom_file_file_name"
+ t.string "dicom_file_content_type"
+ t.integer "dicom_file_file_size"
+ t.datetime "dicom_file_updated_at"
+ end
+
+ create_table "studies", :force => true do |t|
+ t.string "name"
+ t.datetime "created_at"
+ t.datetime "updated_at"
+ t.string "dicom_file"
+ t.string "status"
+ t.string "study_date"
+ end
+
+end
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7 db/seeds.rb
@@ -0,0 +1,7 @@
+# This file should contain all the record creation needed to seed the database with its default values.
+# The data can then be loaded with the rake db:seed (or created alongside the db with db:setup).
+#
+# Examples:
+#
+# cities = City.create([{ name: 'Chicago' }, { name: 'Copenhagen' }])
+# Mayor.create(name: 'Emanuel', city: cities.first)
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2  doc/README_FOR_APP
@@ -0,0 +1,2 @@
+Use this README file to introduce your application and point to useful places in the API for learning more.
+Run "rake doc:app" to generate API documentation for your models, controllers, helpers, and libraries.
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0  lib/assets/.gitkeep
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0  lib/tasks/.gitkeep
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0  log/.gitkeep
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26 public/404.html
@@ -0,0 +1,26 @@
+<!DOCTYPE html>
+<html>
+<head>
+ <title>The page you were looking for doesn't exist (404)</title>
+ <style type="text/css">
+ body { background-color: #fff; color: #666; text-align: center; font-family: arial, sans-serif; }
+ div.dialog {
+ width: 25em;
+ padding: 0 4em;
+ margin: 4em auto 0 auto;
+ border: 1px solid #ccc;
+ border-right-color: #999;
+ border-bottom-color: #999;
+ }
+ h1 { font-size: 100%; color: #f00; line-height: 1.5em; }
+ </style>
+</head>
+
+<body>
+ <!-- This file lives in public/404.html -->
+ <div class="dialog">
+ <h1>The page you were looking for doesn't exist.</h1>
+ <p>You may have mistyped the address or the page may have moved.</p>
+ </div>
+</body>
+</html>
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26 public/422.html
@@ -0,0 +1,26 @@
+<!DOCTYPE html>
+<html>
+<head>
+ <title>The change you wanted was rejected (422)</title>
+ <style type="text/css">
+ body { background-color: #fff; color: #666; text-align: center; font-family: arial, sans-serif; }
+ div.dialog {
+ width: 25em;
+ padding: 0 4em;
+ margin: 4em auto 0 auto;
+ border: 1px solid #ccc;
+ border-right-color: #999;
+ border-bottom-color: #999;
+ }
+ h1 { font-size: 100%; color: #f00; line-height: 1.5em; }
+ </style>
+</head>
+
+<body>
+ <!-- This file lives in public/422.html -->
+ <div class="dialog">
+ <h1>The change you wanted was rejected.</h1>
+ <p>Maybe you tried to change something you didn't have access to.</p>
+ </div>
+</body>
+</html>
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26 public/500.html
@@ -0,0 +1,26 @@
+<!DOCTYPE html>
+<html>
+<head>
+ <title>We're sorry, but something went wrong (500)</title>
+ <style type="text/css">
+ body { background-color: #fff; color: #666; text-align: center; font-family: arial, sans-serif; }
+ div.dialog {
+ width: 25em;
+ padding: 0 4em;
+ margin: 4em auto 0 auto;
+ border: 1px solid #ccc;
+ border-right-color: #999;
+ border-bottom-color: #999;
+ }
+ h1 { font-size: 100%; color: #f00; line-height: 1.5em; }
+ </style>
+</head>
+
+<body>
+ <!-- This file lives in public/500.html -->
+ <div class="dialog">
+ <h1>We're sorry, but something went wrong.</h1>
+ <p>We've been notified about this issue and we'll take a look at it shortly.</p>
+ </div>
+</body>
+</html>
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0  public/favicon.ico
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5 public/robots.txt
@@ -0,0 +1,5 @@
+# See http://www.robotstxt.org/wc/norobots.html for documentation on how to use the robots.txt file
+#
+# To ban all spiders from the entire site uncomment the next two lines:
+# User-Agent: *
+# Disallow: /
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75 public/stylesheets/application.css
@@ -0,0 +1,75 @@
+body {
+ background-color: #4B7399;
+ font-family: Verdana, Helvetica, Arial;
+ font-size: 14px;
+}
+
+a img {
+ border: none;
+}
+
+a {
+ color: #0000FF;
+}
+
+.clear {
+ clear: both;
+ height: 0;
+ overflow: hidden;
+}
+
+#container {
+ width: 75%;
+ margin: 0 auto;
+ background-color: #FFF;
+ padding: 20px 40px;
+ border: solid 1px black;
+ margin-top: 20px;
+}
+
+#flash_notice, #flash_error, #flash_alert {
+ padding: 5px 8px;
+ margin: 10px 0;
+}
+
+#flash_notice {
+ background-color: #CFC;
+ border: solid 1px #6C6;
+}
+
+#flash_error, #flash_alert {
+ background-color: #FCC;
+ border: solid 1px #C66;
+}
+
+.fieldWithErrors {
+ display: inline;
+}
+
+.error_messages {
+ width: 400px;
+ border: 2px solid #CF0000;
+ padding: 0px;
+ padding-bottom: 12px;
+ margin-bottom: 20px;
+ background-color: #f0f0f0;
+ font-size: 12px;
+}
+
+.error_messages h2 {
+ text-align: left;
+ font-weight: bold;
+ padding: 5px 10px;
+ font-size: 12px;
+ margin: 0;
+ background-color: #c00;
+ color: #fff;
+}
+
+.error_messages p {
+ margin: 8px 10px;
+}
+
+.error_messages ul {
+ margin: 0;
+}
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6 script/rails
@@ -0,0 +1,6 @@
+#!/usr/bin/env ruby
+# This command will automatically be run when you run "rails" with Rails 3 gems installed from the root of your application.
+
+APP_PATH = File.expand_path('../../config/application', __FILE__)
+require File.expand_path('../../config/boot', __FILE__)
+require 'rails/commands'
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0  test/fixtures/.gitkeep
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5 test/fixtures/studies.yml
@@ -0,0 +1,5 @@
+one:
+ name: MyString
+
+two:
+ name: MyString
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0  test/functional/.gitkeep
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7 test/functional/notice_mailer_test.rb
@@ -0,0 +1,7 @@
+require 'test_helper'
+
+class NoticeMailerTest < ActionMailer::TestCase
+ # test "the truth" do
+ # assert true
+ # end
+end
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54 test/functional/studies_controller_test.rb
@@ -0,0 +1,54 @@
+require 'test_helper'
+
+class StudiesControllerTest < ActionController::TestCase
+ def test_index
+ get :index
+ assert_template 'index'
+ end
+
+ def test_show
+ get :show, :id => Study.first
+ assert_template 'show'
+ end
+
+ def test_new
+ get :new
+ assert_template 'new'
+ end
+
+ def test_create_invalid
+ Study.any_instance.stubs(:valid?).returns(false)
+ post :create
+ assert_template 'new'
+ end
+
+ def test_create_valid
+ Study.any_instance.stubs(:valid?).returns(true)
+ post :create
+ assert_redirected_to study_url(assigns(:study))
+ end
+
+ def test_edit
+ get :edit, :id => Study.first
+ assert_template 'edit'
+ end
+
+ def test_update_invalid
+ Study.any_instance.stubs(:valid?).returns(false)
+ put :update, :id => Study.first
+ assert_template 'edit'
+ end
+
+ def test_update_valid
+ Study.any_instance.stubs(:valid?).returns(true)
+ put :update, :id => Study.first
+ assert_redirected_to study_url(assigns(:study))
+ end
+
+ def test_destroy
+ study = Study.first
+ delete :destroy, :id => study
+ assert_redirected_to studies_url
+ assert !Study.exists?(study.id)
+ end
+end
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0  test/integration/.gitkeep
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12 test/performance/browsing_test.rb
@@ -0,0 +1,12 @@
+require 'test_helper'
+require 'rails/performance_test_help'
+
+class BrowsingTest < ActionDispatch::PerformanceTest
+ # Refer to the documentation for all available options
+ # self.profile_options = { :runs => 5, :metrics => [:wall_time, :memory]
+ # :output => 'tmp/performance', :formats => [:flat] }
+
+ def test_homepage
+ get '/'
+ end
+end
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13 test/test_helper.rb
@@ -0,0 +1,13 @@
+ENV["RAILS_ENV"] = "test"
+require File.expand_path('../../config/environment', __FILE__)
+require 'rails/test_help'
+
+class ActiveSupport::TestCase
+ # Setup all fixtures in test/fixtures/*.(yml|csv) for all tests in alphabetical order.
+ #
+ # Note: You'll currently still have to declare fixtures explicitly in integration tests
+ # -- they do not yet inherit this setting
+ fixtures :all
+
+ # Add more helper methods to be used by all tests here...
+end
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0  test/unit/.gitkeep
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7 test/unit/study_test.rb
@@ -0,0 +1,7 @@
+require 'test_helper'
+
+class StudyTest < ActiveSupport::TestCase
+ def test_should_be_valid
+ assert Study.new.valid?
+ end
+end
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0  vendor/assets/stylesheets/.gitkeep
No changes.
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0  vendor/plugins/.gitkeep
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