Surrogate Mutation Explorer Code
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shinyapps/tladeras
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.gitignore
README.md
colOrder.txt
copy-mutation-data-DREAM-filtered.RData
geneIntTable.txt
helper.R
intome.RData
plot-results.R
processResults.R
rowOrder.txt
server.R
subtype-melted.txt
summarizeTests.R
surrogate-table.txt
surrogateShiny.Rproj
tcgaResult.RData
ui.R

README.md

surrogateShiny

Surrogate Mutation Explorer Code This code is for the webapp available at https://tladeras.shinyapps.io/surrogateShiny/

surrogate-table.txt is the main data file which is separated by Breast cancer cell line (Sample) and Gene (rows). A Sample-Gene pair makes a unique id for each row in the surrogate table, which allows the webapp to pull up network graphs based on the id of the row.