From 16682b7d42dcd0e1e2f4e426719912e8e890eee0 Mon Sep 17 00:00:00 2001 From: "Ian Buller, PhD, MA" Date: Thu, 4 Feb 2021 11:12:44 -0500 Subject: [PATCH] Prepare v0.1.7 CRAN submission (cont.) Updated R version and Rhub test environments --- NEWS.md | 3 +++ cran-comments.md | 12 ++++++++---- 2 files changed, 11 insertions(+), 4 deletions(-) diff --git a/NEWS.md b/NEWS.md index 8d52714..f1cff2c 100644 --- a/NEWS.md +++ b/NEWS.md @@ -6,6 +6,9 @@ * The latter two corrections required a new argument `bandw` to be added to `gating()`, `lotrrs()`, and `rrs()` functions to allow users to specify bandwidth for the kernel density estimation * Updated the calculation of the spatial correlogram in internal `pval_correct()` function from the `correlog()` function in the 'pgrimess' package to the `modified.ttest()` function in the 'SpatialPack' package * Imports 'lifecycle' package to document deprecated arguments `doplot` and `verbose` in `lotrrs()`, `rrs()`, and `gating()` functions + * In `gating()` function, creates a categorized 'im' based on critical p-value, assigns that value to every point in a 'ppp' object, and subsets points by category + * Removed 'maptools' and 'sp' packages from Imports + * Updated links in 'gateR-package.Rd' for package updates # gateR v0.1.6 * Updated URLs in gateR-package.Rd diff --git a/cran-comments.md b/cran-comments.md index 5dbebb9..4394c46 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -1,19 +1,23 @@ ## This is the seventh resubmission * Updates since previous submission: - * Updated 'spatstat' dependency to include 'spatstat.core' and 'spatstat.geom' because 'spatstat' was recently subsetted + * Updated 'spatstat' dependency to include 'spatstat.core' and 'spatstat.geom' in Imports because 'spatstat' was recently subsetted * Added `p_correct` arugment to `lrren()` and `perlrren()` which calls a new, internal function `pval_correct()` that calculates seven types of corrections for multiple testing * Import 'lifecycle' package to document deprecated arguments `doplot` and `verbose` in `lotrrs()`, `rrs()`, and `gating()` functions + * In `gating()` function, creates a categorized 'im' based on critical p-value, assigns that value to every point in a 'ppp' object, and subsets points by category + * Removed 'maptools' and 'sp' packages from Imports + * Updated links in 'gateR-package.Rd' for package updates * Documentation for `pval_correct()` references a doi that throws a NOTE in win-builder but no other environment ## Test environments -* local OS X install, R 3.6.3 -* win-builder, (devel, oldrelease, release) +* local OS X install, R 4.0.3 +* win-builder, (devel, release, oldrelease) * Rhub * Fedora Linux, R-devel, clang, gfortran * Ubuntu Linux 16.04 LTS, R-release, GCC - * Windows Server 2008 R2 SP1, R-devel, 32⁄64 bit + * Windows Server 2008 R2 SP1, R-devel, 32/64 bit + * Oracle Solaris 10, x86, 32 bit, R-release ## R CMD check results 0 errors | 0 warnings | 0 notes