diff --git a/convertToJs.js b/convertToJs.js index b899c73..793f56f 100644 --- a/convertToJs.js +++ b/convertToJs.js @@ -107,7 +107,7 @@ class ConvertToJs { propertyToJS(xmlObj, obj, property, surroundDecimalsWith) { const xmlElements = []; if (xmlObj.elements) { - for (let element of xmlObj.elements) { + for (const element of xmlObj.elements) { if (element.name === property._name) { xmlElements.push(element); } @@ -116,7 +116,7 @@ class ConvertToJs { const xmlAttributes = []; if (xmlObj.attributes) { const attributeKeys = Object.keys(xmlObj.attributes); - for (let attributeKey of attributeKeys) { + for (const attributeKey of attributeKeys) { if (attributeKey === property._name) { xmlAttributes.push({ name: attributeKey, @@ -255,7 +255,7 @@ class ConvertToJs { case 'Element': case 'BackboneElement': const newValue = {}; - for (let x in property._properties) { + for (const x in property._properties) { const nextProperty = property._properties[x]; this.propertyToJS(value, newValue, nextProperty, surroundDecimalsWith); } diff --git a/convertToJs.js.map b/convertToJs.js.map index 6355ea4..6b2cd4a 100644 --- a/convertToJs.js.map +++ b/convertToJs.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/convertToJs.ts b/convertToJs.ts index f554e7c..397c2ba 100644 --- a/convertToJs.ts +++ b/convertToJs.ts @@ -165,7 +165,7 @@ export class ConvertToJs { const xmlElements = []; if (xmlObj.elements) { - for (let element of xmlObj.elements) { + for (const element of xmlObj.elements) { if (element.name === property._name) { xmlElements.push(element); } @@ -176,7 +176,7 @@ export class ConvertToJs { if (xmlObj.attributes) { const attributeKeys = Object.keys(xmlObj.attributes); - for (let attributeKey of attributeKeys) { + for (const attributeKey of attributeKeys) { if (attributeKey === property._name) { xmlAttributes.push({ name: attributeKey, @@ -329,7 +329,7 @@ export class ConvertToJs { case 'BackboneElement': const newValue = {}; - for (let x in property._properties) { + for (const x in property._properties) { const nextProperty = property._properties[x]; this.propertyToJS(value, newValue, nextProperty, surroundDecimalsWith); } diff --git a/convertToXml.js b/convertToXml.js index 24eb561..fbdad99 100644 --- a/convertToXml.js +++ b/convertToXml.js @@ -42,7 +42,7 @@ class ConvertToXml { throw new Error('Unknown resource type: ' + obj.resourceType); } const properties = this.parser.parsedStructureDefinitions[obj.resourceType]._properties || []; - for (let property of properties) { + for (const property of properties) { this.propertyToXML(resourceElement, this.parser.parsedStructureDefinitions[obj.resourceType], obj, property._name); } return xmlObj; @@ -72,7 +72,7 @@ class ConvertToXml { nextXmlObj.attributes.id = extra.id; } if (extra.fhir_comments) { - for (let fhirComment of extra.fhir_comments) { + for (const fhirComment of extra.fhir_comments) { parentXmlObj.elements.push({ type: 'comment', comment: fhirComment }); } } @@ -130,7 +130,7 @@ class ConvertToXml { break; case 'Element': case 'BackboneElement': - for (let x in propertyType._properties) { + for (const x in propertyType._properties) { const nextProperty = propertyType._properties[x]; this.propertyToXML(nextXmlObj, propertyType, value, nextProperty._name, propertyType._type); } @@ -155,15 +155,15 @@ class ConvertToXml { console.log('Could not find type ' + propertyType._type); } else { - for (let nextProperty of nextType._properties) { + for (const nextProperty of nextType._properties) { this.propertyToXML(nextXmlObj, nextType, value, nextProperty._name, propertyType._type); } } } let hasAttributes = false; - let hasElements = nextXmlObj.elements && nextXmlObj.elements.length > 0; + const hasElements = nextXmlObj.elements && nextXmlObj.elements.length > 0; if (nextXmlObj.attributes) { - for (let attrKey in nextXmlObj.attributes) { + for (const attrKey in nextXmlObj.attributes) { if (nextXmlObj.attributes[attrKey] || nextXmlObj.attributes[attrKey] === false || nextXmlObj.attributes[attrKey] === 0) { hasAttributes = true; } diff --git a/convertToXml.js.map b/convertToXml.js.map index 3d49280..d349dda 100644 --- a/convertToXml.js.map +++ b/convertToXml.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/convertToXml.ts b/convertToXml.ts index c4e6790..0724695 100644 --- a/convertToXml.ts +++ b/convertToXml.ts @@ -81,7 +81,7 @@ export class ConvertToXml { const properties = this.parser.parsedStructureDefinitions[obj.resourceType]._properties || []; - for (let property of properties) { + for (const property of properties) { this.propertyToXML(resourceElement, this.parser.parsedStructureDefinitions[obj.resourceType], obj, property._name); } @@ -126,7 +126,7 @@ export class ConvertToXml { } if (extra.fhir_comments) { - for (let fhirComment of extra.fhir_comments) { + for (const fhirComment of extra.fhir_comments) { parentXmlObj.elements.push({type: 'comment', comment: fhirComment}) } } @@ -188,7 +188,7 @@ export class ConvertToXml { break; case 'Element': case 'BackboneElement': - for (let x in propertyType._properties) { + for (const x in propertyType._properties) { const nextProperty = propertyType._properties[x]; this.propertyToXML(nextXmlObj, propertyType, value, nextProperty._name, propertyType._type); } @@ -214,17 +214,17 @@ export class ConvertToXml { if (!nextType) { console.log('Could not find type ' + propertyType._type); } else { - for (let nextProperty of nextType._properties) { + for (const nextProperty of nextType._properties) { this.propertyToXML(nextXmlObj, nextType, value, nextProperty._name, propertyType._type); } } } let hasAttributes = false; - let hasElements = nextXmlObj.elements && nextXmlObj.elements.length > 0; + const hasElements = nextXmlObj.elements && nextXmlObj.elements.length > 0; if (nextXmlObj.attributes) { - for (let attrKey in nextXmlObj.attributes) { + for (const attrKey in nextXmlObj.attributes) { if (nextXmlObj.attributes[attrKey] || nextXmlObj.attributes[attrKey] === false || nextXmlObj.attributes[attrKey] === 0) { hasAttributes = true; } diff --git a/dist/bundle.js b/dist/bundle.js index 84d5405..d445dad 100644 --- a/dist/bundle.js +++ b/dist/bundle.js @@ -1,9 +1,9 @@ -var 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al"},{"code":"GraphDefinition","display":"GraphDefinition"},{"code":"Group","display":"Group"},{"code":"GuidanceResponse","display":"GuidanceResponse"},{"code":"HealthcareService","display":"HealthcareService"},{"code":"ImagingStudy","display":"ImagingStudy"},{"code":"Immunization","display":"Immunization"},{"code":"ImmunizationEvaluation","display":"ImmunizationEvaluation"},{"code":"ImmunizationRecommendation","display":"ImmunizationRecommendation"},{"code":"ImplementationGuide","display":"ImplementationGuide"},{"code":"InsurancePlan","display":"InsurancePlan"},{"code":"Invoice","display":"Invoice"},{"code":"Library","display":"Library"},{"code":"Linkage","display":"Linkage"},{"code":"List","display":"List"},{"code":"Location","display":"Location"},{"code":"Measure","display":"Measure"},{"code":"MeasureReport","display":"MeasureReport"},{"code":"Media","display":"Media"},{"code":"Medication","display":"Medication"},{"code":"MedicationAdministration","display":"MedicationAdministration"},{"code":"MedicationDispense","display":"MedicationDispense"},{"code":"MedicationKnowledge","display":"MedicationKnowledge"},{"code":"MedicationRequest","display":"MedicationRequest"},{"code":"MedicationStatement","display":"MedicationStatement"},{"code":"MedicinalProduct","display":"MedicinalProduct"},{"code":"MedicinalProductAuthorization","display":"MedicinalProductAuthorization"},{"code":"MedicinalProductContraindication","display":"MedicinalProductContraindication"},{"code":"MedicinalProductIndication","display":"MedicinalProductIndication"},{"code":"MedicinalProductIngredient","display":"MedicinalProductIngredient"},{"code":"MedicinalProductInteraction","display":"MedicinalProductInteraction"},{"code":"MedicinalProductManufactured","display":"MedicinalProductManufactured"},{"code":"MedicinalProductPackaged","display":"MedicinalProductPackaged"},{"code":"MedicinalProductPharmaceutical","display":"MedicinalProductPharmaceutical"},{"code":"MedicinalProductUndesirableEffect","display":"MedicinalProductUndesirableEffect"},{"code":"MessageDefinition","display":"MessageDefinition"},{"code":"MessageHeader","display":"MessageHeader"},{"code":"MolecularSequence","display":"MolecularSequence"},{"code":"NamingSystem","display":"NamingSystem"},{"code":"NutritionOrder","display":"NutritionOrder"},{"code":"Observation","display":"Observation"},{"code":"ObservationDefinition","display":"ObservationDefinition"},{"code":"OperationDefinition","display":"OperationDefinition"},{"code":"OperationOutcome","display":"OperationOutcome"},{"code":"Organization","display":"Organization"},{"code":"OrganizationAffiliation","display":"OrganizationAffiliation"},{"code":"Parameters","display":"Parameters"},{"code":"Patient","display":"Patient"},{"code":"PaymentNotice","display":"PaymentNotice"},{"code":"PaymentReconciliation","display":"PaymentReconciliation"},{"code":"Person","display":"Person"},{"code":"PlanDefinition","display":"PlanDefinition"},{"code":"Practitioner","display":"Practitioner"},{"code":"PractitionerRole","display":"PractitionerRole"},{"code":"Procedure","display":"Procedure"},{"code":"Provenance","display":"Provenance"},{"code":"Questionnaire","display":"Questionnaire"},{"code":"QuestionnaireResponse","display":"QuestionnaireResponse"},{"code":"RelatedPerson","display":"RelatedPerson"},{"code":"RequestGroup","display":"RequestGroup"},{"code":"ResearchDefinition","display":"ResearchDefinition"},{"code":"ResearchElementDefinition","display":"ResearchElementDefinition"},{"code":"ResearchStudy","display":"ResearchStudy"},{"code":"ResearchSubject","display":"ResearchSubject"},{"code":"Resource","display":"Resource"},{"code":"RiskAssessment","display":"RiskAssessment"},{"code":"RiskEvidenceSynthesis","display":"RiskEvidenceSynthesis"},{"code":"Schedule","display":"Schedule"},{"code":"SearchParameter","display":"SearchParameter"},{"code":"ServiceRequest","display":"ServiceRequest"},{"code":"Slot","display":"Slot"},{"code":"Specimen","display":"Specimen"},{"code":"SpecimenDefinition","display":"SpecimenDefinition"},{"code":"StructureDefinition","display":"StructureDefinition"},{"code":"StructureMap","display":"StructureMap"},{"code":"Subscription","display":"Subscription"},{"code":"Substance","display":"Substance"},{"code":"SubstanceNucleicAcid","display":"SubstanceNucleicAcid"},{"code":"SubstancePolymer","display":"SubstancePolymer"},{"code":"SubstanceProtein","display":"SubstanceProtein"},{"code":"SubstanceReferenceInformation","display":"SubstanceReferenceInformation"},{"code":"SubstanceSourceMaterial","display":"SubstanceSourceMaterial"},{"code":"SubstanceSpecification","display":"SubstanceSpecification"},{"code":"SupplyDelivery","display":"SupplyDelivery"},{"code":"SupplyRequest","display":"SupplyRequest"},{"code":"Task","display":"Task"},{"code":"TerminologyCapabilities","display":"TerminologyCapabilities"},{"code":"TestReport","display":"TestReport"},{"code":"TestScript","display":"TestScript"},{"code":"ValueSet","display":"ValueSet"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Myocardium"},{"code":"122113","display":"Sacrred Myocardial"},{"code":"122114","display":"Thinning Myocardium"},{"code":"122120","display":"Hemodynamics Report"},{"code":"122121","display":"Atrial pressure measurements"},{"code":"122122","display":"Ventricular pressure measurements"},{"code":"122123","display":"Gradient assessment"},{"code":"122124","display":"Blood velocity measurements"},{"code":"122125","display":"Blood lab measurements"},{"code":"122126","display":"Derived Hemodynamic Measurements"},{"code":"122127","display":"Clinical Context"},{"code":"122128","display":"Patient Transferred From"},{"code":"122129","display":"PCI during this procedure"},{"code":"122130","display":"Dose Area Product"},{"code":"122131","display":"Degree of Thrombus"},{"code":"122132","display":"Severity of Calcification"},{"code":"122133","display":"Lesion Morphology"},{"code":"122134","display":"Vessel Morphology"},{"code":"122138","display":"Circulatory Support"},{"code":"122139","display":"Reason 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Myocardium"},{"code":"122113","display":"Sacrred Myocardial"},{"code":"122114","display":"Thinning Myocardium"},{"code":"122120","display":"Hemodynamics Report"},{"code":"122121","display":"Atrial pressure measurements"},{"code":"122122","display":"Ventricular pressure measurements"},{"code":"122123","display":"Gradient assessment"},{"code":"122124","display":"Blood velocity measurements"},{"code":"122125","display":"Blood lab measurements"},{"code":"122126","display":"Derived Hemodynamic Measurements"},{"code":"122127","display":"Clinical Context"},{"code":"122128","display":"Patient Transferred From"},{"code":"122129","display":"PCI during this procedure"},{"code":"122130","display":"Dose Area Product"},{"code":"122131","display":"Degree of Thrombus"},{"code":"122132","display":"Severity of Calcification"},{"code":"122133","display":"Lesion Morphology"},{"code":"122134","display":"Vessel Morphology"},{"code":"122138","display":"Circulatory Support"},{"code":"122139","display":"Reason 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al"},{"code":"GraphDefinition","display":"GraphDefinition"},{"code":"Group","display":"Group"},{"code":"GuidanceResponse","display":"GuidanceResponse"},{"code":"HealthcareService","display":"HealthcareService"},{"code":"ImagingStudy","display":"ImagingStudy"},{"code":"Immunization","display":"Immunization"},{"code":"ImmunizationEvaluation","display":"ImmunizationEvaluation"},{"code":"ImmunizationRecommendation","display":"ImmunizationRecommendation"},{"code":"ImplementationGuide","display":"ImplementationGuide"},{"code":"InsurancePlan","display":"InsurancePlan"},{"code":"Invoice","display":"Invoice"},{"code":"Library","display":"Library"},{"code":"Linkage","display":"Linkage"},{"code":"List","display":"List"},{"code":"Location","display":"Location"},{"code":"Measure","display":"Measure"},{"code":"MeasureReport","display":"MeasureReport"},{"code":"Media","display":"Media"},{"code":"Medication","display":"Medication"},{"code":"MedicationAdministration","display":"MedicationAdministration"},{"code":"MedicationDispense","display":"MedicationDispense"},{"code":"MedicationKnowledge","display":"MedicationKnowledge"},{"code":"MedicationRequest","display":"MedicationRequest"},{"code":"MedicationStatement","display":"MedicationStatement"},{"code":"MedicinalProduct","display":"MedicinalProduct"},{"code":"MedicinalProductAuthorization","display":"MedicinalProductAuthorization"},{"code":"MedicinalProductContraindication","display":"MedicinalProductContraindication"},{"code":"MedicinalProductIndication","display":"MedicinalProductIndication"},{"code":"MedicinalProductIngredient","display":"MedicinalProductIngredient"},{"code":"MedicinalProductInteraction","display":"MedicinalProductInteraction"},{"code":"MedicinalProductManufactured","display":"MedicinalProductManufactured"},{"code":"MedicinalProductPackaged","display":"MedicinalProductPackaged"},{"code":"MedicinalProductPharmaceutical","display":"MedicinalProductPharmaceutical"},{"code":"MedicinalProductUndesirableEffect","display":"MedicinalProductUndesirableEffect"},{"code":"MessageDefinition","display":"MessageDefinition"},{"code":"MessageHeader","display":"MessageHeader"},{"code":"MolecularSequence","display":"MolecularSequence"},{"code":"NamingSystem","display":"NamingSystem"},{"code":"NutritionOrder","display":"NutritionOrder"},{"code":"Observation","display":"Observation"},{"code":"ObservationDefinition","display":"ObservationDefinition"},{"code":"OperationDefinition","display":"OperationDefinition"},{"code":"OperationOutcome","display":"OperationOutcome"},{"code":"Organization","display":"Organization"},{"code":"OrganizationAffiliation","display":"OrganizationAffiliation"},{"code":"Parameters","display":"Parameters"},{"code":"Patient","display":"Patient"},{"code":"PaymentNotice","display":"PaymentNotice"},{"code":"PaymentReconciliation","display":"PaymentReconciliation"},{"code":"Person","display":"Person"},{"code":"PlanDefinition","display":"PlanDefinition"},{"code":"Practitioner","display":"Practitioner"},{"code":"PractitionerRole","display":"PractitionerRole"},{"code":"Procedure","display":"Procedure"},{"code":"Provenance","display":"Provenance"},{"code":"Questionnaire","display":"Questionnaire"},{"code":"QuestionnaireResponse","display":"QuestionnaireResponse"},{"code":"RelatedPerson","display":"RelatedPerson"},{"code":"RequestGroup","display":"RequestGroup"},{"code":"ResearchDefinition","display":"ResearchDefinition"},{"code":"ResearchElementDefinition","display":"ResearchElementDefinition"},{"code":"ResearchStudy","display":"ResearchStudy"},{"code":"ResearchSubject","display":"ResearchSubject"},{"code":"Resource","display":"Resource"},{"code":"RiskAssessment","display":"RiskAssessment"},{"code":"RiskEvidenceSynthesis","display":"RiskEvidenceSynthesis"},{"code":"Schedule","display":"Schedule"},{"code":"SearchParameter","display":"SearchParameter"},{"code":"ServiceRequest","display":"ServiceRequest"},{"code":"Slot","display":"Slot"},{"code":"Specimen","display":"Specimen"},{"code":"SpecimenDefinition","display":"SpecimenDefinition"},{"code":"StructureDefinition","display":"StructureDefinition"},{"code":"StructureMap","display":"StructureMap"},{"code":"Subscription","display":"Subscription"},{"code":"Substance","display":"Substance"},{"code":"SubstanceNucleicAcid","display":"SubstanceNucleicAcid"},{"code":"SubstancePolymer","display":"SubstancePolymer"},{"code":"SubstanceProtein","display":"SubstanceProtein"},{"code":"SubstanceReferenceInformation","display":"SubstanceReferenceInformation"},{"code":"SubstanceSourceMaterial","display":"SubstanceSourceMaterial"},{"code":"SubstanceSpecification","display":"SubstanceSpecification"},{"code":"SupplyDelivery","display":"SupplyDelivery"},{"code":"SupplyRequest","display":"SupplyRequest"},{"code":"Task","display":"Task"},{"code":"TerminologyCapabilities","display":"TerminologyCapabilities"},{"code":"TestReport","display":"TestReport"},{"code":"TestScript","display":"TestScript"},{"code":"ValueSet","display":"ValueSet"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Myocardium"},{"code":"122113","display":"Sacrred Myocardial"},{"code":"122114","display":"Thinning Myocardium"},{"code":"122120","display":"Hemodynamics Report"},{"code":"122121","display":"Atrial pressure measurements"},{"code":"122122","display":"Ventricular pressure measurements"},{"code":"122123","display":"Gradient assessment"},{"code":"122124","display":"Blood velocity measurements"},{"code":"122125","display":"Blood lab measurements"},{"code":"122126","display":"Derived Hemodynamic Measurements"},{"code":"122127","display":"Clinical Context"},{"code":"122128","display":"Patient Transferred From"},{"code":"122129","display":"PCI during this procedure"},{"code":"122130","display":"Dose Area Product"},{"code":"122131","display":"Degree of Thrombus"},{"code":"122132","display":"Severity of Calcification"},{"code":"122133","display":"Lesion Morphology"},{"code":"122134","display":"Vessel Morphology"},{"code":"122138","display":"Circulatory Support"},{"code":"122139","display":"Reason 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Myocardium"},{"code":"122113","display":"Sacrred Myocardial"},{"code":"122114","display":"Thinning Myocardium"},{"code":"122120","display":"Hemodynamics Report"},{"code":"122121","display":"Atrial pressure measurements"},{"code":"122122","display":"Ventricular pressure measurements"},{"code":"122123","display":"Gradient assessment"},{"code":"122124","display":"Blood velocity measurements"},{"code":"122125","display":"Blood lab measurements"},{"code":"122126","display":"Derived Hemodynamic Measurements"},{"code":"122127","display":"Clinical Context"},{"code":"122128","display":"Patient Transferred From"},{"code":"122129","display":"PCI during this procedure"},{"code":"122130","display":"Dose Area Product"},{"code":"122131","display":"Degree of Thrombus"},{"code":"122132","display":"Severity of Calcification"},{"code":"122133","display":"Lesion Morphology"},{"code":"122134","display":"Vessel Morphology"},{"code":"122138","display":"Circulatory Support"},{"code":"122139","display":"Reason 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evaluate(resource, fhirPathString) { const fhirPath = new fhirPath_1.FhirPath(resource, this.parser); fhirPath.resolve = this.resolve; return fhirPath.evaluate(fhirPathString); } - ; resolve(reference) { return; } diff --git a/fhir.js.map b/fhir.js.map index af43c96..328ddee 100644 --- a/fhir.js.map +++ b/fhir.js.map @@ -1 +1 @@ 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\ No newline at end of file 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\ No newline at end of file diff --git a/fhir.ts b/fhir.ts index 0e41fa2..44dc37e 100644 --- a/fhir.ts +++ b/fhir.ts @@ -1,6 +1,6 @@ import { ParseConformance } from './parseConformance'; import type { Bundle } from "./model/bundle"; -import type { ValidatorOptions } from './validator'; +import type { ValidatorOptions, ValidatorResponse } from './validator'; import { Validator } from './validator'; import { ConvertToJs } from './convertToJs'; import { ConvertToXml } from './convertToXml'; @@ -39,7 +39,7 @@ export class Fhir { const convertToXML = new ConvertToXml(this.parser); const xml = convertToXML.convert(obj); return xml; - }; + } /** * Serializes an XML resource to a JS object @@ -50,7 +50,7 @@ export class Fhir { const convertToJs = new ConvertToJs(this.parser); const obj = convertToJs.convert(xml); return obj; - }; + } /** * Serializes an XML resource to JSON @@ -61,7 +61,7 @@ export class Fhir { const convertToJs = new ConvertToJs(this.parser); const json = convertToJs.convertToJSON(xml); return json; - }; + } /** * Validates the specified resource (either a JS object or XML string) @@ -69,10 +69,10 @@ export class Fhir { * @param {ValidatorOptions?} options The options to use while validating * @returns {ValidatorResponse} The results of the validation */ - public validate(input: string | Object, options?: ValidatorOptions) { + public validate(input: string | Object, options?: ValidatorOptions): ValidatorResponse { const validator = new Validator(this.parser, options); return validator.validate(input); - }; + } /** * Evaluates a FhirPath against the specified resource(s) @@ -97,7 +97,7 @@ export class Fhir { const fhirPath = new FhirPath(resource, this.parser); fhirPath.resolve = this.resolve; return fhirPath.evaluate(fhirPathString); - }; + } /** * A callback which is executed when a reference needs to be resolved to a resource during evaluation of FhirPath. diff --git a/fhirPath.js.map b/fhirPath.js.map index 8194028..16d2a3e 100644 --- a/fhirPath.js.map +++ b/fhirPath.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/model/bundle.d.ts b/model/bundle.d.ts index b6ce1c4..cb85448 100644 --- a/model/bundle.d.ts +++ b/model/bundle.d.ts @@ -1,4 +1,4 @@ -import { StructureDefinition } from "./structure-definition"; +import type { StructureDefinition } from "./structure-definition"; export interface Bundle { resourceType: string; total: number; diff --git a/package.json b/package.json index 961285a..2ca9d0d 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "fhir", - "version": "4.11.2", + "version": "4.11.3", "description": "Library that assists in handling FHIR resources. Supports serialization between JSON and XML, validation and FhirPath evaluation.", "readme": "README.md", "types": "index.d.ts", @@ -57,9 +57,9 @@ "yargs": "^3.25.0" }, "scripts": { - "test": "./node_modules/.bin/mocha test/**/*.js", - "prepublish": "./node_modules/.bin/tsc & node profiles/packageProfiles.js & webpack --config webpack.config.js", - "docs": "./node_modules/.bin/typedoc -out ./docs -exclude node_modules ./", + "test": "mocha test/**/*.js", + "prepare": "tsc & eslint . --ext .ts --fix & node profiles/packageProfiles.js & webpack --config webpack.config.js", + "docs": "typedoc -out ./docs -exclude node_modules ./", "tsc": "tsc", "lint": "eslint . --ext .ts" }, diff --git a/parseConformance.js b/parseConformance.js index 7e00945..1fde25e 100644 --- a/parseConformance.js +++ b/parseConformance.js @@ -29,7 +29,7 @@ class ParseConformance { const primitiveProperties = properties .filter(p => constants_1.Constants.PrimitiveTypes.indexOf(p._type) >= 0) .filter(p => !p._name.startsWith('_')); - for (let primitiveProp of primitiveProperties) { + for (const primitiveProp of primitiveProperties) { const primitivePropIndex = properties.indexOf(primitiveProp); let foundMeta = properties.find(p => p._name === "_" + primitiveProp._name); if (!foundMeta) { @@ -43,7 +43,7 @@ class ParseConformance { this.ensurePropertyMetaData(primitiveProp._properties || []); } const backboneProperties = properties.filter(p => p._type === 'BackboneElement'); - for (let backboneProp of backboneProperties) { + for (const backboneProp of backboneProperties) { this.ensurePropertyMetaData(backboneProp._properties || []); } } @@ -86,7 +86,6 @@ class ParseConformance { this.codeSystems.push(codeSystem); } } - ; parseBundle(bundle) { if (!bundle || !bundle.entry) { return; @@ -135,7 +134,7 @@ class ParseConformance { this.structureDefinitions.push(structureDefinition); } if (structureDefinition.snapshot && structureDefinition.snapshot.element) { - for (let x in structureDefinition.snapshot.element) { + for (const x in structureDefinition.snapshot.element) { const element = structureDefinition.snapshot.element[x]; let elementId = structureDefinition.snapshot.element[x].id; elementId = elementId.substring(structureDefinition.type.length + 1); @@ -179,7 +178,7 @@ class ParseConformance { return choiceRequired || sliceRequired; }) .length > 0; - for (let y in element.type) { + for (const y in element.type) { let choiceType = element.type[y].code; choiceType = choiceType.substring(0, 1).toUpperCase() + choiceType.substring(1); const choiceElementId = elementId + choiceType; @@ -196,7 +195,7 @@ class ParseConformance { } else if (!elementId.includes(':')) { let isReference = true; - for (let y in element.type) { + for (const y in element.type) { if (element.type[y].code !== 'Reference') { isReference = false; break; @@ -342,7 +341,7 @@ class ParseConformance { } } populateBackboneElement(parsedStructureDefinition, parentElementId, structureDefinition) { - for (let y in structureDefinition.snapshot.element) { + for (const y in structureDefinition.snapshot.element) { const backboneElement = structureDefinition.snapshot.element[y]; let backboneElementId = backboneElement.id; if (!backboneElementId.startsWith(parentElementId + '.') || backboneElementId.split('.').length !== parentElementId.split('.').length + 1) { @@ -398,7 +397,7 @@ class ParseConformance { e.min >= 1; }) .length > 0; - for (let y in backboneElement.type) { + for (const y in backboneElement.type) { let choiceType = backboneElement.type[y].code; choiceType = choiceType.substring(0, 1).toUpperCase() + choiceType.substring(1); const choiceElementId = backboneElement.id.substring(backboneElement.id.lastIndexOf('.') + 1, backboneElement.id.length - 3) + choiceType; @@ -415,7 +414,7 @@ class ParseConformance { } else if (!backboneElementId.includes(':')) { let isReference = true; - for (let z in backboneElement.type) { + for (const z in backboneElement.type) { if (backboneElement.type[z].code !== 'Reference') { isReference = false; break; diff --git a/parseConformance.js.map b/parseConformance.js.map index 96411ed..d991e2d 100644 --- a/parseConformance.js.map +++ b/parseConformance.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/parseConformance.ts b/parseConformance.ts index 2374b36..43f76f2 100644 --- a/parseConformance.ts +++ b/parseConformance.ts @@ -52,7 +52,7 @@ export class ParseConformance { // Constants.PrimitiveTypes contains Element so an additional check for leading underscores is necessary .filter(p => !p._name.startsWith('_')); - for (let primitiveProp of primitiveProperties) { + for (const primitiveProp of primitiveProperties) { const primitivePropIndex = properties.indexOf(primitiveProp); let foundMeta = properties.find(p => p._name === "_" + primitiveProp._name); @@ -69,7 +69,7 @@ export class ParseConformance { } const backboneProperties = properties.filter(p => p._type === 'BackboneElement'); - for (let backboneProp of backboneProperties) { + for (const backboneProp of backboneProperties) { this.ensurePropertyMetaData(backboneProp._properties || []); } @@ -130,7 +130,7 @@ export class ParseConformance { if (!foundCodeSystem) { this.codeSystems.push(codeSystem); } - }; + } /** * Parses any ValueSet and StructureDefinition resources in the bundle and stores @@ -205,7 +205,7 @@ export class ParseConformance { } if (structureDefinition.snapshot && structureDefinition.snapshot.element) { - for (let x in structureDefinition.snapshot.element) { + for (const x in structureDefinition.snapshot.element) { const element = structureDefinition.snapshot.element[x] as ElementDefinition; let elementId = structureDefinition.snapshot.element[x].id; elementId = elementId.substring(structureDefinition.type.length + 1); @@ -254,7 +254,7 @@ export class ParseConformance { return choiceRequired || sliceRequired; }) .length > 0; - for (let y in element.type) { + for (const y in element.type) { let choiceType = element.type[y].code; choiceType = choiceType.substring(0, 1).toUpperCase() + choiceType.substring(1); const choiceElementId = elementId + choiceType; @@ -274,7 +274,7 @@ export class ParseConformance { } else if (!elementId.includes(':')) { let isReference = true; - for (let y in element.type) { + for (const y in element.type) { if (element.type[y].code !== 'Reference') { isReference = false; break; @@ -464,7 +464,7 @@ export class ParseConformance { * @private */ public populateBackboneElement(parsedStructureDefinition, parentElementId, structureDefinition) { - for (let y in structureDefinition.snapshot.element) { + for (const y in structureDefinition.snapshot.element) { const backboneElement = structureDefinition.snapshot.element[y]; let backboneElementId = backboneElement.id; if (!backboneElementId.startsWith(parentElementId + '.') || backboneElementId.split('.').length !== parentElementId.split('.').length + 1) { @@ -527,7 +527,7 @@ export class ParseConformance { e.min >= 1; }) .length > 0; - for (let y in backboneElement.type) { + for (const y in backboneElement.type) { let choiceType = backboneElement.type[y].code; choiceType = choiceType.substring(0, 1).toUpperCase() + choiceType.substring(1); const choiceElementId = backboneElement.id.substring(backboneElement.id.lastIndexOf('.') + 1, backboneElement.id.length - 3) + choiceType; @@ -546,7 +546,7 @@ export class ParseConformance { } else if (!backboneElementId.includes(':')) { let isReference = true; - for (let z in backboneElement.type) { + for (const z in backboneElement.type) { if (backboneElement.type[z].code !== 'Reference') { isReference = false; break; diff --git a/snapshotGenerator.js b/snapshotGenerator.js index 53d496c..c7d8f92 100644 --- a/snapshotGenerator.js +++ b/snapshotGenerator.js @@ -41,7 +41,7 @@ class SnapshotGenerator { const dest = JSON.parse(JSON.stringify(snapshot)); const explicitOverwrites = ['id', 'representation', 'sliceName', 'sliceIsConstraining', 'label', 'code', 'short', 'definition', 'comment', 'requirements', 'alias', 'min', 'max', 'contentReference', 'meaningWhenMissing', 'orderMeaning', 'maxLength', 'condition', 'mustSupport', 'isModifier', 'isModifierReason', 'isSummary', 'example']; - for (let eo of explicitOverwrites) { + for (const eo of explicitOverwrites) { if (diff.hasOwnProperty(eo)) dest[eo] = diff[eo]; } @@ -70,7 +70,7 @@ class SnapshotGenerator { dest.base = diff.base; } if (diff.type && dest.type) { - for (let dt of dest.type) { + for (const dt of dest.type) { const diffType = diff.type.find(t => t.code === dt.code); if (diffType) { if (diffType.hasOwnProperty('profile')) @@ -83,7 +83,7 @@ class SnapshotGenerator { dt.versioning = diffType.versioning; } } - for (let diffType of diff.type) { + for (const diffType of diff.type) { if (!dest.type.find(t => t.code === diffType.code)) { dest.type.push(JSON.parse(JSON.stringify(diffType))); } @@ -93,7 +93,7 @@ class SnapshotGenerator { dest.type = diff.type; } if (diff.constraint && dest.constraint) { - for (let dc of dest.constraint) { + for (const dc of dest.constraint) { const diffConstraint = diff.constraint.find(c => c.key === dc.key); if (diffConstraint) { if (diffConstraint.hasOwnProperty('requirements')) @@ -110,7 +110,7 @@ class SnapshotGenerator { dc.source = diffConstraint.source; } } - for (let diffConstraint of diff.constraint) { + for (const diffConstraint of diff.constraint) { if (!dest.constraint.find(c => c.key === diffConstraint.key)) { dest.constraint.push(JSON.parse(JSON.stringify(diffConstraint))); } diff --git a/snapshotGenerator.js.map b/snapshotGenerator.js.map index e53efea..f1ac6e7 100644 --- a/snapshotGenerator.js.map +++ b/snapshotGenerator.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/snapshotGenerator.ts b/snapshotGenerator.ts index cba6d12..797faf7 100644 --- a/snapshotGenerator.ts +++ b/snapshotGenerator.ts @@ -89,7 +89,7 @@ export class SnapshotGenerator { const explicitOverwrites = ['id', 'representation', 'sliceName', 'sliceIsConstraining', 'label', 'code', 'short', 'definition', 'comment', 'requirements', 'alias', 'min', 'max', 'contentReference', 'meaningWhenMissing', 'orderMeaning', 'maxLength', 'condition', 'mustSupport', 'isModifier', 'isModifierReason', 'isSummary', 'example']; - for (let eo of explicitOverwrites) { + for (const eo of explicitOverwrites) { if (diff.hasOwnProperty(eo)) dest[eo] = diff[eo]; } @@ -111,7 +111,7 @@ export class SnapshotGenerator { } if (diff.type && dest.type) { - for (let dt of dest.type) { + for (const dt of dest.type) { const diffType = diff.type.find(t => t.code === dt.code); if (diffType) { @@ -122,7 +122,7 @@ export class SnapshotGenerator { } } - for (let diffType of diff.type) { + for (const diffType of diff.type) { if (!dest.type.find(t => t.code === diffType.code)) { dest.type.push(JSON.parse(JSON.stringify(diffType))); } @@ -132,7 +132,7 @@ export class SnapshotGenerator { } if (diff.constraint && dest.constraint) { - for (let dc of dest.constraint) { + for (const dc of dest.constraint) { const diffConstraint = diff.constraint.find(c => c.key === dc.key); if (diffConstraint) { @@ -145,7 +145,7 @@ export class SnapshotGenerator { } } - for (let diffConstraint of diff.constraint) { + for (const diffConstraint of diff.constraint) { if (!dest.constraint.find(c => c.key === diffConstraint.key)) { dest.constraint.push(JSON.parse(JSON.stringify(diffConstraint))); } diff --git a/test/data/r4/location.xml b/test/data/r4/location.xml new file mode 100644 index 0000000..0355be6 --- /dev/null +++ b/test/data/r4/location.xml @@ -0,0 +1,24 @@ + + + + + + + + +
Burgers UMC, South Wing, second floor +
+ + + + + + + + + + + + \ No newline at end of file diff --git a/test/data/r4/medicationStatement.json b/test/data/r4/medicationStatement.json index d79d352..067a7a2 100644 --- a/test/data/r4/medicationStatement.json +++ b/test/data/r4/medicationStatement.json @@ -134,7 +134,7 @@ ], "dosage": [ { - "sequence": 1, + "sequence": "1", "text": "1-2 tablets once daily at bedtime as needed for restless legs", "additionalInstruction": [ { diff --git a/test/validation.js b/test/validation.js index 95bbb27..7d2c0b3 100644 --- a/test/validation.js +++ b/test/validation.js @@ -10,11 +10,13 @@ var r4StructureDefinitionJson = fs.readFileSync('./test/data/r4/structureDefinit var badDocumentBundleXml = fs.readFileSync('./test/data/r4/bad-document-example-dischargesummary.xml').toString(); var operationDefinitionJson = fs.readFileSync('./test/data/stu3/OperationDefinition_example.json').toString(); var bundleTransactionXml = fs.readFileSync('./test/data/stu3/bundle-transaction.xml').toString(); +var medicationStatementJson = fs.readFileSync('./test/data/r4/medicationStatement.json').toString(); var medicationStatementXml = fs.readFileSync('./test/data/r4/medicationStatement.xml').toString(); var condition2Json = fs.readFileSync('./test/data/stu3/condition-example2.json').toString(); var immunizationExampleJson = fs.readFileSync('./test/data/r4/immunization-example.json').toString(); var auditEventExampleJson = fs.readFileSync('./test/data/r4/audit-event-example.json').toString(); var implementationGuideJson = fs.readFileSync('./test/data/r4/implementationGuide.json').toString(); +var locationXml = fs.readFileSync('./test/data/r4/location.xml').toString(); describe('Validation', function () { this.timeout(5000); @@ -222,6 +224,21 @@ describe('Validation', function () { assert.equal(warnings.length, 5); }); + it('should fail medication statement JSON', function () { + var results = fhirR4.validate(medicationStatementJson); + assert(results); + assert.equal(results.valid, false); + + var errors = results.messages.filter((message) => { + return message.severity === 'error'; + }); + assert.equal(errors[0].location, 'MedicationStatement.dosage[0].sequence'); + assert.equal(errors[0].message, 'Number type expected but string received for value "1"'); + assert.equal(errors[0].resourceId, 'example001'); + assert.equal(errors[0].severity, 'error'); + + }); + it('should fail JS bundle with incorrect type', function () { var bundle = { resourceType: 'Bundle', @@ -537,5 +554,87 @@ describe('Validation', function () { assert.strictEqual(beforeCheckCodeCalled, true); assert.strictEqual(results.messages.length, 2); }); + + + it('should validate location with correct position data types', function() { + const location = { + resourceType: "Location", + id: "1", + meta: { + versionId: "20" + }, + position: { + "longitude": -83.6945691, + "latitude": 42.25475478, + "altitude": 0 + } + }; + + var results = fhirR4.validate(location); + assert(results); + assert.equal(results.valid, true); + + assert(results.messages); + assert.equal(results.messages.length, 0); + + }); + + it('should fail location validation with incorrect position data types', function() { + const location = { + resourceType: "Location", + id: "1", + meta: { + versionId: "20" + }, + position: { + "longitude": "-83.6945691", + "latitude": "42.25475478", + "altitude": 0 + } + } + + var results = fhirR4.validate(location); + assert(results); + assert.equal(results.valid, false); + + assert.equal(results.messages[0].location, 'Location.position.longitude'); + assert.equal(results.messages[0].resourceId, '1'); + assert.equal(results.messages[0].severity, 'error'); + assert.equal(results.messages[0].message, 'Number type expected but string received for value "-83.6945691"'); + assert.equal(results.messages[1].location, 'Location.position.latitude'); + assert.equal(results.messages[1].resourceId, '1'); + assert.equal(results.messages[1].severity, 'error'); + assert.equal(results.messages[1].message, 'Number type expected but string received for value "42.25475478"'); + + }); + + + it('should validate location from XML file', function () { + var results = fhirR4.validate(locationXml); + assert(results); + assert.equal(results.valid, true); + }); + + + it('should fail patient validation with string instead of bool', function () { + const patient = { + resourceType: "Patient", + id: "patient-example", + meta: { + versionId: "20" + }, + active: "true" + } + + var results = fhirR4.validate(patient); + assert(results); + assert.equal(results.valid, false); + + assert.equal(results.messages[0].location, 'Patient.active'); + assert.equal(results.messages[0].resourceId, 'patient-example'); + assert.equal(results.messages[0].severity, 'error'); + assert.equal(results.messages[0].message, 'Invalid format for boolean value "true"'); + }); + }); }); diff --git a/validator.js b/validator.js index 73763e6..0219172 100644 --- a/validator.js +++ b/validator.js @@ -28,7 +28,7 @@ class Validator { this.obj = JSON.parse(input); } else if (typeof (input) === 'string') { - this.obj = new convertToJs_1.ConvertToJs().convert(input); + this.obj = JSON.parse(new convertToJs_1.ConvertToJs().convertToJSON(input)); this.isXml = true; } else { @@ -120,7 +120,6 @@ class Validator { this.options.onError(theMessage); } } - ; addFatal(location, message) { this.response.valid = false; this.response.messages.push({ @@ -130,7 +129,6 @@ class Validator { message: message }); } - ; addWarn(location, message) { this.response.messages.push({ location: location, @@ -139,7 +137,6 @@ class Validator { message: message }); } - ; addInfo(location, message) { this.response.messages.push({ location: location, @@ -148,7 +145,6 @@ class Validator { message: message }); } - ; validateNext(obj, property, tree) { const treeDisplay = Validator.getTreeDisplay(tree, this.isXml); const propertyTypeStructure = this.parser.parsedStructureDefinitions[property._type]; @@ -200,23 +196,24 @@ class Validator { } } if (constants_1.Constants.PrimitiveTypes.indexOf(property._type) >= 0) { - if (property._type === 'boolean' && obj.toString().toLowerCase() !== 'true' && obj.toString().toLowerCase() !== 'false') { + if (property._type === 'boolean' && typeof (obj) !== 'boolean') { this.addError(treeDisplay, 'Invalid format for boolean value "' + obj.toString() + '"'); } else if (constants_1.Constants.PrimitiveNumberTypes.indexOf(property._type) >= 0) { if (typeof (obj) === 'string') { - if (property._type === 'integer' && !constants_1.Constants.PrimitiveIntegerRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid integer format for value "' + obj + '"'); - } - else if (property._type === 'decimal' && !constants_1.Constants.PrimitiveDecimalRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid decimal format for value "' + obj + '"'); - } - else if (property._type === 'unsignedInt' && !constants_1.Constants.PrimitiveUnsignedIntRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid unsigned integer format for value "' + obj + '"'); - } - else if (property._type === 'positiveInt' && !constants_1.Constants.PrimitivePositiveIntRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid positive integer format for value "' + obj + '"'); - } + this.addError(treeDisplay, 'Number type expected but string received for value "' + obj + '"'); + } + else if (property._type === 'integer' && !constants_1.Constants.PrimitiveIntegerRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid integer format for value "' + obj + '"'); + } + else if (property._type === 'decimal' && !constants_1.Constants.PrimitiveDecimalRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid decimal format for value "' + obj + '"'); + } + else if (property._type === 'unsignedInt' && !constants_1.Constants.PrimitiveUnsignedIntRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid unsigned integer format for value "' + obj + '"'); + } + else if (property._type === 'positiveInt' && !constants_1.Constants.PrimitivePositiveIntRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid positive integer format for value "' + obj + '"'); } } else if (property._type === 'date' && !constants_1.Constants.PrimitiveDateRegex.test(obj)) { diff --git a/validator.js.map b/validator.js.map index 80ea334..3b667be 100644 --- a/validator.js.map +++ b/validator.js.map @@ -1 +1 @@ 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\ No newline at end of file diff --git a/validator.ts b/validator.ts index c713642..da4a77f 100644 --- a/validator.ts +++ b/validator.ts @@ -128,7 +128,7 @@ export class Validator { if (typeof(input) === 'string' && input.indexOf('{') === 0) { this.obj = JSON.parse(input); } else if (typeof(input) === 'string') { - this.obj = new ConvertToJs().convert(input); + this.obj = JSON.parse(new ConvertToJs().convertToJSON(input)); this.isXml = true; } else { this.obj = input; @@ -234,7 +234,7 @@ export class Validator { if (this.options.onError) { this.options.onError(theMessage); } - }; + } private addFatal(location: string, message: string) { this.response.valid = false; @@ -244,7 +244,7 @@ export class Validator { severity: Severities.Fatal, message: message }); - }; + } private addWarn(location: string, message: string) { this.response.messages.push({ @@ -253,7 +253,7 @@ export class Validator { severity: Severities.Warning, message: message }); - }; + } private addInfo(location: string, message: string) { this.response.messages.push({ @@ -262,7 +262,7 @@ export class Validator { severity: Severities.Information, message: message }); - }; + } private validateNext(obj, property: ParsedProperty, tree) { const treeDisplay = Validator.getTreeDisplay(tree, this.isXml); @@ -317,19 +317,19 @@ export class Validator { } if (Constants.PrimitiveTypes.indexOf(property._type) >= 0) { - if (property._type === 'boolean' && obj.toString().toLowerCase() !== 'true' && obj.toString().toLowerCase() !== 'false') { + if (property._type === 'boolean' && typeof(obj) !== 'boolean') { this.addError(treeDisplay, 'Invalid format for boolean value "' + obj.toString() + '"'); } else if (Constants.PrimitiveNumberTypes.indexOf(property._type) >= 0) { if (typeof(obj) === 'string') { - if (property._type === 'integer' && !Constants.PrimitiveIntegerRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid integer format for value "' + obj + '"'); - } else if (property._type === 'decimal' && !Constants.PrimitiveDecimalRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid decimal format for value "' + obj + '"'); - } else if (property._type === 'unsignedInt' && !Constants.PrimitiveUnsignedIntRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid unsigned integer format for value "' + obj + '"'); - } else if (property._type === 'positiveInt' && !Constants.PrimitivePositiveIntRegex.test(obj)) { - this.addError(treeDisplay, 'Invalid positive integer format for value "' + obj + '"'); - } + this.addError(treeDisplay, 'Number type expected but string received for value "' + obj + '"'); + } else if (property._type === 'integer' && !Constants.PrimitiveIntegerRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid integer format for value "' + obj + '"'); + } else if (property._type === 'decimal' && !Constants.PrimitiveDecimalRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid decimal format for value "' + obj + '"'); + } else if (property._type === 'unsignedInt' && !Constants.PrimitiveUnsignedIntRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid unsigned integer format for value "' + obj + '"'); + } else if (property._type === 'positiveInt' && !Constants.PrimitivePositiveIntRegex.test(obj)) { + this.addError(treeDisplay, 'Invalid positive integer format for value "' + obj + '"'); } } else if (property._type === 'date' && !Constants.PrimitiveDateRegex.test(obj)) { this.addError(treeDisplay, 'Invalid date format for value "' + obj + '"');