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additional-analyses
brainspan
figure-expressed-regions
figure-single-base
gtex
simulation
timing
venn
.gitignore
.nojekyll
README.md
check-analysis-time.R
index.Rmd
index.bib
index.html
run-all.sh
step1-fullCoverage.R
step1-fullCoverage.sh
step10-region_cuts.R
step10-region_cuts.sh
step10b-region_cuts-merge.R
step2-makeModels.R
step2-makeModels.sh
step3-analyzeChr.R
step3-analyzeChr.sh
step4-mergeResults.sh
step5-derfinderReport.sh
step6-regionMatrix.R
step6-regionMatrix.sh
step6b-regionMatrix-merge.R
step7-regMatVsDERs.R
step7-regMatVsDERs.Rmd
step7-regMatVsDERs.sh
step8-coverageToExon.R
step8-coverageToExon.sh
step9-summaryInfo.R
step9-summaryInfo.Rmd
step9-summaryInfo.sh

README.md