leidenuniv-lacdr-abs

Repositories

• jupyter-labs-base-container

  Base container with common tools and libs installed for data analysis using Jupyter
  Dockerfile Apache-2.0 0 0 0 0 Updated Jan 8, 2020

• simms

  Sample Intake Model Mass Spectrometry
  Jupyter Notebook Apache-2.0 0 0 0 0 Updated Nov 10, 2019

• container-data-analysis

  Base container to do data analysis
  Dockerfile Apache-2.0 0 0 0 0 Updated Sep 26, 2019

• notebook-example-project

  Example project/template for using Jupyter notebooks with Docker
  Jupyter Notebook Apache-2.0 0 0 0 0 Updated Sep 25, 2019

• mzQuality

  Tool for quality monitoring and reporting of mass spectrometry measurements.
  Python Apache-2.0 0 0 1 0 Updated Jul 17, 2019

• container-msms

  Container used for MS/MS data processing and analysis
  Dockerfile 0 0 0 0 Updated Jul 12, 2019

• python-snakemake-node

  Container for default Python scripts to use in Snakemake
  Dockerfile GPL-3.0 0 0 0 0 Updated May 22, 2019

• iso2flux

  Forked from cfoguet/iso2flux
  Python GPL-3.0 4 0 0 0 Updated Feb 26, 2019

• intro-python-and-r

  Introduction to Python and R
  Jupyter Notebook Apache-2.0 0 0 0 0 Updated Jan 29, 2019

• metabolomexchange

  Source code of the site MetabolomeXchange.org
  PHP Apache-2.0 1 1 3 0 Updated Jan 23, 2019

• container-base-image-data-analysis

  Jupyter/Rstudio browser based teaching base image
  Dockerfile Apache-2.0 0 0 0 0 Updated Oct 30, 2018

• data-analysis-teaching-environment

  Jupyter/Rstudio browser based teaching base image
  Dockerfile 0 0 0 0 Updated Oct 30, 2018

• notebooks

  A collection of Jupyter notebooks
  Jupyter Notebook Apache-2.0 0 0 0 0 Updated Oct 10, 2018

• container-mzquality

  Forked from phnmnl/container-mzquality

  Container for running mzQuality
  Shell Apache-2.0 1 0 0 0 Updated Jul 12, 2018

• ms-vfetc

  mass spec vendor feature export tool converter
  PHP Apache-2.0 0 0 0 0 Updated Jun 28, 2018

• container-ms-vfetc

  Forked from phnmnl/container-ms-vfetc
  Shell Apache-2.0 1 0 0 0 Updated Jun 15, 2018

• mzQuality-R-package
  R 0 1 2 0 Updated Jun 14, 2018

• metabolomexchange-api

  New setup seperates the frontend from the API code.
  PHP 0 0 0 0 Updated Dec 18, 2017

• metabolomexchange-feeds

  Provider feeds for MetabolomeXchange.org
  PHP Apache-2.0 0 0 0 0 Updated Dec 9, 2017

• container-galaxy-k8s-runtime

  Forked from phnmnl/container-galaxy-k8s-runtime

  First version of a PhenoMeNal runtime for Galaxy running inside a container orchestrator
  Python 18 0 0 0 Updated Jul 25, 2017

• metabolomexchange-api-r-examples

  Collection of R calls to test and to demonstrate the use of the API from R
  R Apache-2.0 1 0 0 0 Updated Oct 27, 2015

• metabolomexchange-vagrant

  A Vagrant setup to run a local instance of MetabolomeXchange
  Shell Apache-2.0 0 0 0 0 Updated May 18, 2015