ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
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README.md

ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.

Key features:

  • able to handle datasets as big as 1012 voxels
  • multichannel images
  • powerful and simple Python API to query arbitrary regions within the fused volume

How to install

On Ubuntu 16.04 LTS, run these commands:

sudo apt-get install libfftw3-dev
sudo pip3 install zetastitcher

Documentation

Please read the documentation and follow the tutorial at this page: https://lens-biophotonics.github.io/ZetaStitcher/