Introduction to Integrative Omics: Proteomics

• short URL: http://tinyurl.com/Intro-Integ-Omics-Prot (current)
• Introduction to Integrative Omics
• Previous content 05 March 2015, EMBL-EBI

Table of content

1. Use case 1: Integration of mass spectrometry based proteomics and RNA-Seq transcriptomics - caveats and mapping
2. Use case 2: Combining exerimental spatial proteomics and third-pary data using transfer learning to improve inference of sub-cellular localisation of proteins.

Material: slides.pdf doi:10.6084/m9.figshare.3085462.

Software

All the example are produced with Bioconductor packages, in particular Pbase, MSnbase and pRoloc.

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