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Commits on May 31, 2016
  1. Merge branch 'dev'

    committed May 31, 2016
  2. Merge branch 'dev'

    committed May 31, 2016
  3. Release bwa-0.7.15-r1140

    committed May 31, 2016
Commits on May 20, 2016
  1. Merge branch 'dev'

    committed May 20, 2016
  2. r1138: fixed typo in insert size estimate (#65)

    credit to @sjackman
    committed May 20, 2016
Commits on May 4, 2016
  1. Merge branch 'dev'

    committed May 4, 2016
  2. Release 0.7.14-r1136

    committed May 4, 2016
Commits on May 3, 2016
  1. Merge branch 'dev'

    committed May 3, 2016
  2. r1134: use AH:* instead of AH:Y

    committed May 3, 2016
Commits on Apr 28, 2016
  1. Merge branch 'dev'

    committed Apr 28, 2016
  2. r1130: changed "ah" to "AH"

    committed Apr 28, 2016
Commits on Mar 17, 2016
  1. Merge pull request #55 from jdagilliland/master

    Minor doc fix
    committed Mar 17, 2016
  2. @jdagilliland

    Minor doc fix

    MAN page described `bwa mem` option `-D` variously as integer and float,
    when it is in fact a float.
    jdagilliland committed Mar 17, 2016
Commits on Mar 16, 2016
  1. option to skip ALT

    committed Mar 16, 2016
Commits on Feb 23, 2016
  1. Merge branch 'dev'

    committed Feb 23, 2016
  2. Released bwa-0.7.13 (r1126)

    committed Feb 23, 2016
  3. Merge branch 'dev'

    committed Feb 23, 2016
  4. use /usr/env/perl

    committed Feb 23, 2016
  5. added comment

    committed Feb 23, 2016
  6. Port #48 to the dev branch

    committed Feb 23, 2016
  7. Merge pull request #48 from srl147/master

    ensure bwa_sa2pos does not return without setting strand
    committed Feb 23, 2016
  8. Merge branch 'dev'

    committed Feb 23, 2016
Commits on Feb 13, 2016
  1. moved indexing to libbwa

    committed Feb 13, 2016
Commits on Feb 11, 2016
  1. @srl147

    fix assertion failure report on bio-bwa-help mailing list

    bwase.c:180: bwa_refine_gapped_core: Assertion `re - rb == rlen' failed
    srl147 committed Feb 11, 2016
Commits on Feb 1, 2016
  1. Merge branch 'dev'

    committed Feb 1, 2016
  2. r1102: resumed versioning

    committed Feb 1, 2016
  3. Merge branch 'dev'

    committed Feb 1, 2016
  4. updated GRCh38 download link

    committed Feb 1, 2016
  5. use /usr/bin/env perl

    committed Feb 1, 2016
Commits on Jan 27, 2016
  1. integer overflow on indexing

    committed Jan 27, 2016
  2. make kthread.c compiled with g++

    committed Jan 27, 2016