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@lh3 lh3 released this Oct 23, 2017 · 13 commits to master since this release

This release adds option -q to preserve the mapping quality of split alignment
with a lower alignment score than the primary alignment. Option -5
automatically applies -q as well. BWA outputs identical alignments to the
previous version unless option -5 is used.

(0.7.17: 23 October 2017, r1188)

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