From 081df6ac7df97c43f2d45a1d62840a62bdf03683 Mon Sep 17 00:00:00 2001
From: xdudiagnoa <47234985+xdudiagnoa@users.noreply.github.com>
Date: Mon, 16 Sep 2019 17:21:40 +0800
Subject: [PATCH] Fix example.c seq read logic

for every idx should map all input seqs
---
 example.c | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/example.c b/example.c
index 80e493ce..ca1fdbe2 100644
--- a/example.c
+++ b/example.c
@@ -35,6 +35,8 @@ int main(int argc, char *argv[])
 	while ((mi = mm_idx_reader_read(r, n_threads)) != 0) { // traverse each part of the index
 		mm_mapopt_update(&mopt, mi); // this sets the maximum minimizer occurrence; TODO: set a better default in mm_mapopt_init()!
 		mm_tbuf_t *tbuf = mm_tbuf_init(); // thread buffer; for multi-threading, allocate one tbuf for each thread
+		gzrewind(f);
+		kseq_rewind(ks);
 		while (kseq_read(ks) >= 0) { // each kseq_read() call reads one query sequence
 			mm_reg1_t *reg;
 			int j, i, n_reg;