From a7a01fe5bd4923f767c33b08d2a2f34790b16eec Mon Sep 17 00:00:00 2001 From: Heng Li Date: Tue, 21 Jan 2020 10:43:31 -0500 Subject: [PATCH] r973: fixed compiling errors caused --- align.c | 2 +- main.c | 2 +- options.c | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/align.c b/align.c index eac7056f..a7c4c3cd 100644 --- a/align.c +++ b/align.c @@ -908,6 +908,6 @@ mm_reg1_t *mm_align_skeleton(void *km, const mm_mapopt_t *opt, const mm_idx_t *m kfree(km, qseq0[0]); kfree(km, ez.cigar); mm_filter_regs(opt, qlen, n_regs_, regs); - mm_hit_sort(km, n_regs_, regs, opt->alt_diff_frac); + mm_hit_sort(km, n_regs_, regs, opt->alt_drop); return regs; } diff --git a/main.c b/main.c index b2362f52..2e05626d 100644 --- a/main.c +++ b/main.c @@ -7,7 +7,7 @@ #include "mmpriv.h" #include "ketopt.h" -#define MM_VERSION "2.17-r972-dirty" +#define MM_VERSION "2.17-r973-dirty" #ifdef __linux__ #include diff --git a/options.c b/options.c index 4210beca..8276b24a 100644 --- a/options.c +++ b/options.c @@ -35,7 +35,7 @@ void mm_mapopt_init(mm_mapopt_t *opt) opt->min_join_flank_sc = 1000; opt->min_join_flank_ratio = 0.5f; - opt->alt_diff_frac = 0.15f; + opt->alt_drop = 0.15f; opt->a = 2, opt->b = 4, opt->q = 4, opt->e = 2, opt->q2 = 24, opt->e2 = 1; opt->sc_ambi = 1;