@likelet likelet released this Oct 22, 2018 · 13 commits to master since this release

  • Add ncRNA name map output
  • Fix typos
Assets 2
Pre-release

@likelet likelet released this Sep 27, 2018 · 26 commits to master since this release

  • Fix typos
  • Add tolerance to null design file
  • Fix hisat2 alignment parameters
  • Add singularity support
Assets 2

@likelet likelet released this Aug 18, 2018 · 41 commits to master since this release

  • fix some known bugs for generate input of lncPipeReporter
  • fix docker image supporting bugs
Assets 2

@likelet likelet released this Aug 1, 2018 · 46 commits to master since this release

  • Remove the functions that can automaticaly build index for alignment.
  • fix '-resume' not working for alignment step.
  • Add support for skipping qc analysis steps
Assets 2
Jul 30, 2018
fix parameter check bugs

@likelet likelet released this Mar 28, 2018 · 88 commits to master since this release

#Major improvement

  • support for extra non-human species
  • add fastp support
  • add HTseq quantification support
  • add DESeq2 and NOIseq DEanalysis surport
  • fix a big bug that filtered a lot of known lncRNAs !
  • change the quantification from transcripts level to gene level !
  • fix exon miscounting induced by differ output of stringtie and cufflinks
  • fix several spelling errors in readme and code file
Assets 2
Mar 28, 2018
stable version 2

@likelet likelet released this Feb 6, 2018 · 105 commits to master since this release

v0.1.1
fix issues caused by configuration in multiple operation system and environment

Assets 2

@likelet likelet released this Dec 9, 2017 · 120 commits to master since this release

v0.1.0

version 0.1.0 release
Assets 2