Be notified of new releases
Create your free GitHub account today to subscribe to this repository for new releases and build software alongside 31 million developers.Sign up
- Remove the functions that can automaticaly build index for alignment.
- fix '-resume' not working for alignment step.
- Add support for skipping qc analysis steps
- support for extra non-human species
- add fastp support
- add HTseq quantification support
- add DESeq2 and NOIseq DEanalysis surport
- fix a big bug that filtered a lot of known lncRNAs !
- change the quantification from transcripts level to gene level !
- fix exon miscounting induced by differ output of stringtie and cufflinks
- fix several spelling errors in readme and code file