From ca0847027eb0dfaf6e19c09aeb57c32337d44286 Mon Sep 17 00:00:00 2001 From: Yiming Yang Date: Wed, 6 Jul 2022 00:00:03 -0400 Subject: [PATCH] update release notes --- docs/release_notes/version_1_7.rst | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/docs/release_notes/version_1_7.rst b/docs/release_notes/version_1_7.rst index b4e92774..f1e25079 100644 --- a/docs/release_notes/version_1_7.rst +++ b/docs/release_notes/version_1_7.rst @@ -6,7 +6,8 @@ * Add `pegasus.elbowplot <./api/pegasus.elbowplot.html>`_ function to generate elbowplot, with an automated suggestion on number of PCs to be selected based on random matrix theory (`[Johnstone 2001] `_ and `[Shekhar 2022] `_). * Add `arcsinh_transform <./api/pegasus.arcsinh_transform.html>`_ function for arcsinh transformation on the count matrix. -**API Changes** +**Improvement** * Function ``nearest_neighbors`` has additional argument ``n_comps`` to allow use part of the components from the source embedding for calculating the nearest neighbor graph. * Add ``n_comps`` argument for ``run_harmony``, ``tsne``, ``umap``, and ``fle`` (argument name is ``rep_ncomps``) functions to allow select part of the components from the source embedding. +* Function ``scatter`` can plot multiple components and bases.