diff --git a/.Rprofile b/.Rprofile
deleted file mode 100644
index 504b663d9..000000000
--- a/.Rprofile
+++ /dev/null
@@ -1,279 +0,0 @@
-if (file.exists("~/.Rprofile")) {
- base::sys.source("~/.Rprofile", envir = environment())
-}
-
-options(blogdown.new_bundle = TRUE)
-options(blogdown.hugo.version = "0.95.0")
-options(blogdown.method = 'markdown')
-options(blogdown.knit.on_save = FALSE)
-
-
-reminder_jupyter <- function(file = "./content/getting-started/06_rappels_classes.Rmd",
- out = "ipynb"){
-
- sprintf(
- "jupytext --to %s %s",
- out,
- file
- )
-
-}
-
-download_badge <- function(notebook = "", github_link = 'https://github.com/linogaliana/python-datascientist'){
-
- if (notebook == ""){
- link <- sprintf(
- "https://downgit.github.io/#/home?url=%s/blob/master/notebooks/course",
- github_link
- )
- } else{
- link <- sprintf(
- "https://downgit.github.io/#/home?url=%s%s",
- github_link,
- notebook
- )
- }
-
-
- return(
- sprintf(
- "[![Download](https://img.shields.io/badge/Download-Notebook-important?logo=Jupyter)](%s)",
- link
- )
- )
-
-}
-
-visualize_badge <- function(notebook = "", github_link = 'https://github.com/linogaliana/python-datascientist'){
-
-
- if (notebook == ""){
- nbviewer_link <- 'https://nbviewer.jupyter.org/github/linogaliana/python-datascientist/tree/master'
- } else{
- nbviewer_link <- sprintf(
- 'https://nbviewer.jupyter.org/github/linogaliana/python-datascientist/blob/master%s',
- notebook
- )
- }
-
-
- return(
- sprintf(
- "[![nbviewer](https://img.shields.io/badge/Visualize-nbviewer-blue?logo=Jupyter)](%s)",
- nbviewer_link
- )
- )
-
-}
-
-
-reminder_badges <- function(notebook = "", onyxia_only = FALSE, split = NULL,
- type = c("md", "html")){
-
- type <- match.arg(type)
-
- if (notebook != ""){
- if (!endsWith(notebook, ".ipynb")){
- notebook <- paste0(notebook, ".ipynb")
- }
- github_link <- 'https://github.com/linogaliana/python-datascientist/blob/master'
- binder_path <- paste0("?filepath=",notebook)
- notebook <- paste0('/', notebook)
- nbviewer_link <- sprintf(
- 'https://nbviewer.jupyter.org/github/linogaliana/python-datascientist/blob/master%s',
- notebook
- )
- chapter <- tools::file_path_sans_ext(basename(notebook))
- section <- basename(dirname(notebook))
- } else{
- github_link <- 'https://github.com/linogaliana/python-datascientist'
- binder_path <- ""
- nbviewer_link <- 'https://nbviewer.jupyter.org/github/linogaliana/python-datascientist/tree/master'
- }
-
- if (type == "md"){
- download_link <- sprintf(
- "[![Download](https://img.shields.io/badge/Download-Notebook-important?logo=Jupyter)](https://downgit.github.io/#/home?url=%s%s)",
- github_link,
- notebook
- )
- } else{
- download_link <- sprintf(
- '',
- github_link,
- notebook
- )
- }
-
- github_link <- sprintf('',
- github_link,
- notebook)
-
- if (type == "md"){
- nbviewer_link <- paste0(
- "[![nbviewer](https://img.shields.io/badge/Visualize-nbviewer-blue?logo=Jupyter)](",
- nbviewer_link,")"
- )
- } else{
- nbviewer_link <- sprintf(
- '',
- nbviewer_link
- )
- }
-
- chapter <- tools::file_path_sans_ext(basename(notebook))
- section <- basename(dirname(notebook))
-
- onyxia_link_tmplt <- paste0(
- "https://datalab.sspcloud.fr/launcher/inseefrlab-helm-charts-datascience/jupyter",
- "?autoLaunch=true&onyxia.friendlyName=%C2%ABpython-datascience%C2%BB",
- "&init.personalInit=%C2%ABhttps%3A%2F%2Fraw.githubusercontent.com%2Flinogaliana%2Fpython-datascientist%2Fmaster%2Fsspcloud%2Finit-jupyter.sh%C2%BB",
- "&init.personalInitArgs=%C2%AB${section}%20${chapter}%C2%BB&security.allowlist.enabled=false"
- )
- onyxia_link_launcher <- stringr::str_interp(onyxia_link_tmplt, list(section=section, chapter=chapter))
- if (type == "md"){
- onyxia_link <- paste0(
- "[![Onyxia](https://img.shields.io/badge/SSPcloud-Tester%20via%20SSP--cloud-informational&color=yellow?logo=Python)]",
- "(",onyxia_link_launcher,")"
- )
- } else{
- onyxia_link <- sprintf(
- '',
- onyxia_link_launcher
- )
- }
-
- if (!is.null(split) && (4 %in% split)){
- onyxia_link <- c(onyxia_link, "
")
- }
-
- if (type == "md"){
- binder_link <- sprintf(
- "[![Binder](https://img.shields.io/badge/Launch-Binder-E66581.svg?logo=data:image/png;base64,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)](https://mybinder.org/v2/gh/linogaliana/python-datascientist/master%s)",
- binder_path
- )
- } else{
- binder_link <- sprintf(
- '',
- binder_path
- )
- }
-
- if (!is.null(split) && (5 %in% split)){
- binder_link <- c(binder_link, "
")
- }
-
- if (type == "md"){
- colab_link <- sprintf("[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](http://colab.research.google.com/github/linogaliana/python-datascientist/blob/master%s)",
- notebook)
- } else{
- colab_link <- sprintf(
- '',
- notebook
- )
- }
-
- if (!is.null(split) && (6 %in% split)){
- colab_link <- c(colab_link, "
")
- }
-
- if (type == "md"){
- vscode_link <- sprintf("[![githubdev](https://open.vscode.dev/badges/open-in-vscode.svg)](https://github.dev/linogaliana/python-datascientist%s)",
- notebook)
- } else{
- vscode_link <- sprintf(
- '
', badges, '
') - return( - cat(badges, sep = "\n") - ) - -} - - -print_badges <- function(fpath = NULL, onyxia_only = FALSE, split = 4){ - if (is.null(fpath)){ - fpath <- knitr::current_input(dir = TRUE) - } - fpath <- gsub(paste0(here::here(),"/./"), "", fpath) - fpath <- gsub("Rmd", "ipynb", fpath) - fpath <- gsub("content","notebooks",fpath) - reminder_badges(fpath, onyxia_only = onyxia_only, split = split) -} - -github_link <- function(fpath = NULL){ - if (is.null(fpath)){ - fpath <- knitr::current_input(dir = TRUE) - } - fpath <- gsub(paste0(here::here(),"/./"), "", fpath) - fpath <- gsub("Rmd", "ipynb", fpath) - fpath <- gsub("content","notebooks",fpath) - return(fpath) -} - - -reminder_box <- function(boxtype = "warning", type = c("html","markdown")){ - type <- match.arg(type) - icon <- switch(boxtype, - warning = "fa fa-exclamation-triangle", - hint = "fa fa-lightbulb", - tip = "fa fa-lightbulb", - note = "fa fa-comment", - exercise = "fas fa-pencil-alt") - box <- c( - sprintf( - '{{< panel status="%s" title="%s" icon="%s" >}}', - boxtype, - Hmisc::capitalize(boxtype), - icon - ), - "Example", - "{{< /panel >}}" - ) - if (type == "html") cat(box, sep = "\n") - - box <- gsub("<","%", box) - box <- gsub(">","%", box) - - cat(box, sep = "\n") -} - -# Hook from Maelle Salmon: https://ropensci.org/technotes/2020/04/23/rmd-learnings/ -modif_plot <- function(x, options, dir_path) { - hugoopts <- options$hugoopts - paste0( - "{", "{