The goal of CCCheatmap is to build custom heatmaps from the output of CellChat. These are modified versions of the heatmaps produced by their command \code{netVisual_heatmap}. It allows the user to choose specific populations as senders and receivers for which to consider signaling. The colors are the sum of the communication probabilities for a given pathway between two designated cell types.
You can install the development version of CCCheatmap from GitHub with:
# install.packages("devtools")
devtools::install_github("lkroeh/CCCheatmap")This is a basic example which shows you how to make a heatmap:
library(CCCheatmap)
cellchatobject
hm <- makehm(cellchatobject)
hm