IMSEQ - IMmunogenetic SEQuence Analysis
C++ C Objective-C CMake Shell
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Failed to load latest commit information.
cmake
examples
src
unit_test
util
.travis.yml
CMakeLists.txt
Homo.Sapiens.IGH.fa
Homo.Sapiens.IGK.fa
Homo.Sapiens.IGL.fa
Homo.Sapiens.TRA.fa
Homo.Sapiens.TRB.fa
INFO
LICENSE
Macaca.fascicularis.IGH.fa
README.md

README.md

IMSEQ - An immunogenetic sequence analysis tool

Build Status GitHub release

This is the source code repository for IMSEQ. For information about IMSEQ and release downloads visit www.imtools.org!

Building IMSEQ

These instructions apply if you want to build IMSEQ from the git repository.

Requirements

  • A C++14 capable compiler
  • ZLIB

Instructions

Clone the repository

$ git clone https://github.com/lkuchenb/imseq.git
$ cd imseq

Configure a build directory

$ mkdir build
$ cd build
$ cmake ..

Build IMSEQ

$ make imseq

Troubleshooting

  • Cmake will attempt to download the SeqAn Library. If this fails or you want to use your own copy of SeqAn, invoke cmake with -DSEQAN_ROOT=/path/to/seqan.
  • If you want to use a compiler different from your systems default compiler, invoke cmake with -DCMAKE_CXX_COMPILER=/path/to/c++