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Create a cromphensive report of DEG list coming from any analysis of RNAseq data
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README.md

DEGreport

Build status Project Status: Active - The project has reached a stable, usable state and is being actively developed. BioC Downloads coverage

QCs, figures and analyses after differential expression with DESeq2 or other similar tool.

Pantano L (2017). DEGreport: Report of DEG analysis. R package version 1.13.8.

DOI: 10.18129/B9.bioc.DEGreport

Installation

This is an R package.

Bioconductor stable version

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("DEGreport")

Bioconductor latest version

devtools::install_git("https://git@git.bioconductor.org/packages/DEGreport")

devtools unstable version

install.packages("devtools")
devtools::install_github("lpantano/DEGreport")

Load the package and learn what to do:

browseVignettes("DEGreport")

Here is the last devel vignette.

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