Skip to content
miraligner
Switch branches/tags
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 
 
 
 
 
 
 

seqbuster

Please, be aware that the user friendly interface is desecrated. SeqBuster only keeps updated miraligner as an independent file.

Project Status: Active – The project has reached a stable, usable state and is being actively developed.

Read how to annotate miRNAs/isomiRs from fastq files in our documentation page.

Validators of the latest versions are here.

Some comparison between many tools here.

Download

Click here

Cite

SeqBuster is a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells. Pantano L, Estivill X, Martí E. Nucleic Acids Res. 2010 Mar;38(5):e34. Epub 2009 Dec 11.

See also

Other tools related to small RNA analysis.

  • R package isomiRs to visualize isomiRs and miRNA abundances in a group of samples (new)
  • seqcluster analyzes the rest of small RNAs and annotate to multiple databases in bed format (new)

The development of Seqbuster was partly funded by the EU Seventh Framework Programme [FP7/2007-2013, grant number 262055, ESGI]. http://www.esgi-infrastructure.eu/

About

pipeline for the analysis of small RNA data

Resources

Packages

No packages published