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- Princeton University
MAVEN: Core Libraries
Maven GUI: Metabolomics Analysis and Visualization Engine
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission
Collection of scripts and code snippets for data harvesting after generating the zip starter
Conda recipes for the bioconda channel.
NuDup -- Marks/removes duplicate molecules based on the molecular tagging technology used in NuGEN products.
Utilities for building and managing bioconda recipes
Galaxy project website, aka Galaxy Community Hub
Command-line utilities to assist in developing tools for the Galaxy project.
Data intensive biology for everyone.
Wrappers for galaxy tools
Contains a set of Galaxy Tools mostly written by the Galaxy Team.
Documentation for standards and best practices from the Galaxy IUC
Galaxy tools developed at TGAC
Gene Set Enrichment Analysis Made Awesome
MACS -- Model-based Analysis of ChIP-Seq
Scientific formulae for the Homebrew package manager
GenomeTools genome analysis system.
The missing package manager for OS X.
a friendly homebrew-style CLI workflow for the administration of Mac applications distributed as binaries
A powerful toolset for genome arithmetic.
A static website generator - Toss some content, templates, and media in a pan and fry it up!
cutadapt removes adapter sequences from DNA sequencing reads
Multiplexed Shotgun Genotyping