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Popular repositories

  1. Parameter inference by fitting stochastic transmission models to both disease incidence time-series and pathogen phylogeny.

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  2. EpiGenR Public

    Inference from both epidemiological and genetic data. Functions generate input files for EpiGenMCMC and to visualise output.

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  3. Teaching material for MCMC class at HSPH

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  4. Data from Cholera outbreak in Yemen, 2017

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  5. GenBank Public

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September 2022

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