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Commits on May 23, 2013
  1. BLD Add Makefile

    committed May 23, 2013
Commits on Jul 18, 2012
  1. BUG Handle bowtie output (12 fields)

    Last field has a meaning, but we ignore it.
    committed Jul 18, 2012
  2. ENH Have sam-filter accept "-" as in/out

    Also, refactor to use Utils.hs
    committed Jul 18, 2012
Commits on Jul 17, 2012
  1. RFCT Better code

    Remove ParBuffer: it was not complete
    committed Jul 17, 2012
Commits on Jul 9, 2012
  1. BUG Update interface

    committed Jul 9, 2012
Commits on Jun 22, 2012
  1. ENH Conver fastq sub-formats

    committed Jun 22, 2012
  2. ENH Handle - correctly

    Otherwise, when redirecting on the shell, it can lead to unintuitive
    results. For example,
    
    embl-to-fasta input - >>file.fa
    
    will truncate the file!
    committed Jun 22, 2012
  3. ENH Use a constant instead of function

    This might be correctly inlined
    committed Jun 22, 2012
  4. ENH Compile embl-to-fasta

    committed Jun 22, 2012
Commits on Jun 14, 2012
  1. ENH Show progress

    committed Jun 14, 2012
  2. ENH idP is already available

    committed Jun 14, 2012
  3. RFCT Use impure code for simplicity

    This could be done in the ST monad too, if purity is desired
    committed Jun 14, 2012
  4. ENH Select fastq sub-format

    committed Jun 14, 2012
Commits on Jun 8, 2012
  1. RFCT Use monadic interface to conduit

    This is simpler code
    committed Jun 8, 2012
  2. ENH Update to newer conduit

    committed Jun 8, 2012
Commits on Jun 5, 2012
  1. BLD NGH needs conduit >= 0.5

    committed Jun 5, 2012
Commits on Jun 4, 2012
  1. ENH Simple format conversion

    committed Jun 4, 2012
Commits on Jun 1, 2012
  1. MIN Show as integer

    committed Jun 1, 2012
  2. ENH sam-filter utility

    committed Jun 1, 2012
  3. ENH Better error message

    committed Jun 1, 2012
  4. MIN export readSamLine

    committed Jun 1, 2012
  5. ENH Trim based on qualities

    committed Jun 1, 2012
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