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Organizations

@dib-lab @DataSounds @Lasanha

Pinned

  1. Compute and compare MinHash signatures for DNA data sets.

    Standard ML 130 26

  2. In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 553 284

  3. This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.

    15

  4. a simple read-only sequence database, designed for short reads

    Python 42 27

89 contributions in 2019

Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec Mon Wed Fri
Activity overview
Contributed to luizirber/ukhs, dib-lab/sourmash, camillescott/boink and 5 other repositories
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Contribution activity

March 2019

Created a pull request in camillescott/boink that received 2 comments

add install instructions, remove unused kmer.cc file

These install instructions work on these systems: Ubuntu 16.04.5 LTS, gcc (Ubuntu 5.5.0-12ubuntu1~16.04) 5.5.0 20171010 Arch Linux, gcc (GCC) 8.2.…

2 comments

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