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Pinned

  1. Compute and compare MinHash signatures for DNA data sets.

    Python 180 37

  2. This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.

    17 1

  3. ntHash implementation in Rust

    Rust 13 3

  4. In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 599 295

  5. Apresentação para o Pyjamas 2019

    Jupyter Notebook 2

356 contributions in 2020

Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec Mon Wed Fri

Contribution activity

March 2020

Created a pull request in conda-forge/staged-recipes that received 4 comments

new recipe: hydra

Checklist Title of this PR is meaningful: e.g. "Adding my_nifty_package", not "updated meta.yaml" License file is packaged (see here for an exa…

+42 −0 4 comments

Created an issue in dib-lab/sourmash that received 2 comments

add a containment option to compare

right now sourmash compare uses only similarity, it can be useful to support --containment too. Notes: similarity is symmetric, containment is not…

2 comments

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