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Pinned

  1. Compute and compare MinHash signatures for DNA data sets.

    Standard ML 159 34

  2. In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 588 293

  3. This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.

    17 1

  4. a simple read-only sequence database, designed for short reads

    Python 45 28

Contribution activity in Söding Lab

December 2019

Created a pull request in soedinglab/MMseqs2 that received 3 comments

[WIP] Add tutorial as notebook, and configure Binder

Hi! I copied the tutorial from the wiki into a Jupyter notebook, and configured binder to be able to run it. Here is an example: Notes I'm buildi…

+932 −0 3 comments

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