{\rtf1\ansi\ansicpg1252\cocoartf2513
\cocoatextscaling0\cocoaplatform0{\fonttbl\f0\fnil\fcharset0 Menlo-Regular;}
{\colortbl;\red255\green255\blue255;\red0\green0\blue0;}
{\*\expandedcolortbl;;\csgray\c0;}
\margl1440\margr1440\vieww10800\viewh8400\viewkind0
\pard\tx560\tx1120\tx1680\tx2240\tx2800\tx3360\tx3920\tx4480\tx5040\tx5600\tx6160\tx6720\pardirnatural\partightenfactor0

\f0\fs22 \cf2 \CocoaLigature0 estimate type 0\
edge list loaded\
[[0, 1], [1, 2], [1, 3], [3, 4], [3, 6], [6, 5], [6, 7], [7, 8], [7, 9], [9, 10], [9, 11], [10, 12], [10, 13], [11, 14], [11, 15], [15, 16], [15, 17], [16, 18], [16, 19], [17, 20], [17, 21]]\
branch list loaded\
[0.0, 0.1502, 0.356, 0.1136, 0.0505, 0.0708, 0.0083, 0.0683, 0.0119, 0.014, 0.0068, 0.0529, 0.0498, 0.0674, 0.0468, 0.0071, 0.0236, 0.0265, 0.0252, 0.0161, 0.0161]\
species names loaded\
dana\
path list loaded\
['/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dana', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dbia', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dele', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dtri', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dtak', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/deug', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dere', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dyak', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dsim', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dfic', '/scratch/nt365/Phylo-HMRF/dmel_phylo/data/for_phylohmrf/dmel']\
2\
4702.0\
['dfic', 'dtri', 'dele', 'deug', 'dbia', 'dtak', 'dyak', 'dere', 'dmel', 'dana', 'dsim']\
[226 146  31 ...,   1   1   1]\
[64 16 18 ...,  1  2  1]\
[93 29 13 ...,  1  1  1]\
[47 38 16 ...,  2  1  1]\
[40 29  4 ...,  2  1  1]\
[973  78  99 ...,   1   1   1]\
[3 1 1 ..., 1 1 1]\
[39 25  6 ...,  1  1  1]\
[1 1 1 ..., 1 1 1]\
[88 71 38 ...,  5  1  1]\
[372 479 112 ...,   1   1   1]\
[[  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   2.98000000e+02   2.98000000e+02\
    1.36729200e+06   1.36729200e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   6.01000000e+02   6.01000000e+02\
    1.13805000e+06   1.13805000e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   1.00060000e+04   1.00060000e+04\
    2.68343700e+06   2.68343700e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   1.12880000e+04   1.12880000e+04\
    1.42828300e+06   1.42828300e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   1.39900000e+03   1.39900000e+03\
    1.78317500e+06   1.78317500e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   4.15000000e+03   4.15000000e+03\
    1.28767100e+06   1.28767100e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   5.60900000e+03   5.60900000e+03\
    2.06460400e+06   2.06460400e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   1.80600000e+03   1.80600000e+03\
    2.44978500e+06   2.44978500e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   1.36620000e+04   1.36620000e+04\
    9.69699000e+05   9.69699000e+05]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   5.90600000e+03   5.90600000e+03\
    2.41865400e+06   2.41865400e+06]\
 [  1.00000000e+00   1.00000000e+00   1.00000000e+00   1.00000000e+00\
    1.00000000e+00   1.00000000e+00   8.21000000e+02   8.21000000e+02\
    4.20935400e+06   4.20935400e+06]]\
4150.0\
processes\
4702.0\
1367292\
12446705\
Process Process-1:\
Traceback (most recent call last):\
  File "/home/nt365/anaconda3/envs/ph/lib/python2.7/multiprocessing/process.py", line 267, in _bootstrap\
    self.run()\
  File "/home/nt365/anaconda3/envs/ph/lib/python2.7/multiprocessing/process.py", line 114, in run\
    self._target(*self._args, **self._kwargs)\
  File "/scratch/nt365/Phylo-HMRF/utility.py", line 344, in load_data_chromosome_sub1_2\
    data_ori = multi_contact_matrix3A(chrom, resolution, ref_filename, filename_list, species, output_filename, type_id)\
  File "/scratch/nt365/Phylo-HMRF/utility.py", line 2556, in multi_contact_matrix3A\
    data_2 = output_multi_contactMtx(serial1, colnames, species, value_dict, value_dict1, resolution, output_filename)\
  File "/scratch/nt365/Phylo-HMRF/utility.py", line 2637, in output_multi_contactMtx\
    idx = mapping_Idx(serial1,temp1)\
  File "/scratch/nt365/Phylo-HMRF/utility.py", line 848, in mapping_Idx\
    idx1[map_sortedIdx[b1]] = idx\
ValueError: shape mismatch: value array of shape (1339500,) could not be broadcast to indexing result of shape (1367292,)}