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# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
PortSystem 1.0
name clustalx
version 2.1
categories science
maintainers {snc @nerdling} openmaintainer
license LGPL-3 GPL-3
description An interface for the ClustalW multiple sequence alignment\
program.
long_description ${name} provides an integrated environment for performing\
multiple sequence and profile alignments and analysing the\
results. The sequence alignment is displayed in a window on\
the screen. A versatile coloring scheme has been\
incorporated allowing you to highlight conserved features\
in the alignment. The pull-down menus at the top of the\
window allow you to select all the options required for\
traditional multiple sequence and profile alignment.
homepage http://www.clustal.org/clustal2/
platforms darwin
depends_build port:qt4-mac
master_sites http://www.clustal.org/download/current/ \
ftp://ftp.ebi.ac.uk/pub/software/clustalw2/${version}/
dist_subdir ${name}/${version}_1
checksums rmd160 a50b74d2b698a6ab618c5ce8bcb0139976814ffd \
sha256 e10adb728c320598a165ca529f1aa3d2560061de0236e0a0926eaca9554afa05
configure.cmd ${prefix}/libexec/qt4/bin/qmake
configure.pre_args PREFIX=${prefix}
destroot {
xinstall -d ${destroot}${applications_dir}/${name}.app/Contents/MacOS
xinstall -d ${destroot}${applications_dir}/${name}.app/Contents/Resources
xinstall -m 755 {*}[glob ${worksrcpath}/${name}.app/Contents/MacOS/*] \
${destroot}${applications_dir}/${name}.app/Contents/MacOS/
xinstall -m 755 {*}[glob ${worksrcpath}/${name}.app/Contents/Resources/*] \
${destroot}${applications_dir}/${name}.app/Contents/Resources/
xinstall -m 644 -W ${worksrcpath} \
colprot.xml coldna.xml colprint.xml clustalx.hlp \
${destroot}${applications_dir}/${name}.app/Contents/MacOS/
}
universal_variant no
livecheck.type regex
livecheck.url ${homepage}
livecheck.regex "currently (\\d+(\\.\\d+)+)"