Daniel Marbach edited this page Oct 5, 2015 · 11 revisions

Magnum is a java app for GWAS pathway and network analysis. This wiki is for both the app and the command-line tool.

Website

Reference

  • Marbach D, Lamparter D, Quon G, Kellis M, Kutalik Z, and Bergmann S. Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases. Submitted (preprint available upon request).

Features

  • Network connectivity enrichment analysis
  • Compute network properties: diffusion kernels, shortest path lengths, clustering coefficients
  • Perform network operations: union

Magnum is under active development, more features are currently being added.


On this wiki


UNIL logo SIB logo

Broad logo MIT logo

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