/harvest-tools

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  1. C++ 88.0%
  2. Python 5.9%
  3. Makefile 1.8%
  4. Protocol Buffer 1.8%
  5. Cap'n Proto 1.6%
  6. M4 0.8%
  7. Other 0.1%
C++ Python Makefile Protocol Buffer Cap'n Proto M4 Other

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Latest commit ce55be5 Sep 30, 2016 Brian Ondov for for insertion rendering in Gingr
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src for for insertion rendering in Gingr Sep 30, 2016
test simple test case Dec 3, 2013
.travis.yml Travis build fix (for renamed binary) Dec 31, 2014
CITATION merge Aug 5, 2014
INSTALL.py Update INSTALL.py Dec 10, 2014
INSTALL.txt deployment info in install instructions Mar 25, 2015
LICENSE.txt License file and headers Jul 18, 2014
Makefile.in fix for non-standard capnp install location Aug 2, 2016
README.md Updated docs link to RTD and removed downloads Feb 10, 2015
bootstrap.sh working import and tree operations Jun 17, 2014
configure.ac --with-capnp configure flag fixed Feb 27, 2015
harvest-snps.py harvest utility scripts (2/5) Dec 2, 2013
harvest-variants.py harvest utility scripts (2/5) Dec 2, 2013
setup.py harvest utility scripts and reqs Dec 3, 2013

README.md

HarvestTools is a part of the Harvest software suite and provides file conversion between Gingr files and various standard text formats (see Harvest).

HarvestTools is normally distributed as a binary for OS X or Linux (see Harvest link above). However, the source is provided here for unique build environments or for development.

CITATION provides details on how to cite HarvestTools. INSTALL.txt provides instructions for building from source and installing. LICENSE.txt provides licensing information.