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TypeError _call_() takes 3 positional arguments but 5 were given #393
I am using cutadapt on the university server and it was installed by the IT team (we upload it via module system).
cutadapt -b GATCGGAAGAGCACACGTCTGAACTCCAGTCAC -b ATCTCGTATGCCGTCTTCTGCTTG -B AATGATACGGCGACCACCGAGATCTACAC -B ACACTCTTTCCCTACACGACGCTCTTCCGATCT -e 0.2 -n 3 --discard-trimmed --info-file read1.txt -q 20 -m 40 -o read1-trimmed1.fastq.gz -p read2-trimmed2.fastq.gz AH3TLYBBXX_lane4-s324-index--CACCTTAC-CTTCGCCT-84-505_S324_L004_R1_001.fastq.gz AH3TLYBBXX_lane4-s324-index--CACCTTAC-CTTCGCCT-84-505_S324_L004_R2_001.fastq.gz
Here it is:
This is cutadapt 2.4 with Python 3.7.2
I’ve fixed the crash. The problem was that the
And for completeness: The same crash would also have occurred for the options
If you want to test this, please install the development version of Cutadapt.