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1 parent 186a338 commit 3b97d755d2577abcc485f006e6a063f951d4f207 @marinkaz committed Apr 3, 2012
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@@ -20,6 +20,12 @@ for some quality measures. By setting runtime specific options tracking the resi
Extensive documentation with working examples which demonstrate real applications, commonly used benchmark data and visualization methods are provided to help with the
interpretation and comprehension of the results.
+
+Citing
+======
+
+Marinka Zitnik, Blaz Zupan. Nimfa: A Python Library for Nonnegative Matrix Factorization, Journal of Machine Learning Research, 13, 849--853, 2012.
+
License
======
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@@ -124,7 +124,7 @@
# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
-#html_last_updated_fmt = '%b %d, %Y'
+html_last_updated_fmt = '%b %d, %Y'
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
@@ -153,7 +153,7 @@
html_show_sphinx = False
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
-#html_show_copyright = True
+html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
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@@ -30,12 +30,10 @@ Further real-world examples and demonstrations of library capabilities are provi
.. note:: See also a `short presentation about nimfa.`_
-.. topic:: News:
+.. note:: Marinka Zitnik, Blaz Zupan. Nimfa: `A Python Library for Nonnegative Matrix Factorization, Journal of Machine Learning Research`_, 13, 849--853, 2012.
- A paper entitled "NIMFA -- A Python Library for Nonnegative Matrix Factorization" has been accepted for publication in the `Journal of Machine Learning Research`_ (JMLR).
-
-
-.. _Journal of Machine Learning Research: http://www.jmlr.org
+
+.. _A Python Library for Nonnegative Matrix Factorization, Journal of Machine Learning Research: http://jmlr.csail.mit.edu/papers/v13/zitnik12a.html
.. _Examples section: nimfa.examples.html
@@ -240,22 +238,26 @@ References
.. [Schachtner2008] R. Schachtner, D. Lutter, P. Knollmueller, A. M. Tome, F. J. Theis, G. Schmitz, M. Stetter, P. Gomez Vilda and E. W. Lang. Knowledge-based gene expression classification via matrix factorization. Bioinformatics, 24(15): 1688-1697, 2008.
-###############
-Acknowledgement
-###############
+################
+Acknowledgements
+################
+
+We would like to acknowledge support for this project from the Google Summer of Code 2011 program and
+from the Slovenian Research Agency grants P2-0209, J2-9699, and L2- 1112.
The nimfa - A Python Library for Nonnegative Matrix Factorization Techniques is part of the Google Summer of Code 2011 program by `Marinka Zitnik`_
under supervision of the `Orange`_ organization and mentor `Prof. Blaz Zupan, PhD`_.
.. _Prof. Blaz Zupan, PhD: http://www.biolab.si/en/blaz/
.. _Marinka Zitnik: http://helikoid.si
-.. image:: http://orange.biolab.si/small-logo.png
+.. image:: /images/base/orange-logo.png
:target: http://orange.biolab.si
-.. image:: http://code.google.com/p/google-summer-of-code/logo?cct=1280260724
+.. image:: /images/base/google-logo.png
:target: http://code.google.com/soc/
+ :scale: 50 %
##########

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